Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx1P63006 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx1P63006 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx1P63006 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lhx1P63006 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Lhx1P63006 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx1P63006 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Lhx1P63006 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx1P63006 Snord83b-201ENSMUST00000104546 94 ntBASIC12.74□□□□□ -0.37
Lhx1P63006 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lhx1P63006 Mir1247-201ENSMUST00000116706 82 ntBASIC12.74□□□□□ -0.37
Lhx1P63006 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.74□□□□□ -0.37
Lhx1P63006 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.74□□□□□ -0.37
Lhx1P63006 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lhx1P63006 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Lhx1P63006 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.74□□□□□ -0.37
Lhx1P63006 Gm3890-201ENSMUST00000182416 207 ntBASIC12.74□□□□□ -0.37
Lhx1P63006 Gm45331-201ENSMUST00000209868 554 ntBASIC12.74□□□□□ -0.37
Lhx1P63006 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
Lhx1P63006 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.74□□□□□ -0.37
Lhx1P63006 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.74□□□□□ -0.37
Lhx1P63006 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC12.74□□□□□ -0.37
Lhx1P63006 Gm18041-201ENSMUST00000218210 618 ntBASIC12.74□□□□□ -0.37
Lhx1P63006 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx1P63006 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx1P63006 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx1P63006 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx1P63006 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.74□□□□□ -0.37
Lhx1P63006 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx1P63006 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx1P63006 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx1P63006 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx1P63006 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx1P63006 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx1P63006 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Lhx1P63006 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC12.73□□□□□ -0.37
Lhx1P63006 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.73□□□□□ -0.37
Lhx1P63006 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.73□□□□□ -0.37
Lhx1P63006 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Gm18222-201ENSMUST00000202416 1387 ntBASIC12.73□□□□□ -0.37
Lhx1P63006 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.73□□□□□ -0.37
Lhx1P63006 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lhx1P63006 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lhx1P63006 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC12.73□□□□□ -0.37
Lhx1P63006 Gm6023-201ENSMUST00000118217 606 ntBASIC12.73□□□□□ -0.37
Lhx1P63006 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC12.73□□□□□ -0.37
Lhx1P63006 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.73□□□□□ -0.37
Lhx1P63006 Gm24548-201ENSMUST00000158650 108 ntBASIC12.73□□□□□ -0.37
Lhx1P63006 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC12.73□□□□□ -0.37
Lhx1P63006 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC12.73□□□□□ -0.37
Lhx1P63006 Gm43118-201ENSMUST00000199149 775 ntBASIC12.73□□□□□ -0.37
Lhx1P63006 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.73□□□□□ -0.37
Lhx1P63006 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.73□□□□□ -0.37
Lhx1P63006 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC12.73□□□□□ -0.37
Lhx1P63006 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC12.73□□□□□ -0.37
Lhx1P63006 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.73□□□□□ -0.37
Lhx1P63006 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.73□□□□□ -0.37
Lhx1P63006 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Dnm2-201ENSMUST00000072362 3502 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Gm8798-201ENSMUST00000211877 1661 ntBASIC12.73□□□□□ -0.37
Lhx1P63006 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Lhx1P63006 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.73□□□□□ -0.37
Lhx1P63006 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Srd5a1-202ENSMUST00000091514 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Lhx1P63006 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx1P63006 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx1P63006 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx1P63006 Gm37324-201ENSMUST00000194500 4504 ntBASIC12.72□□□□□ -0.37
Lhx1P63006 Slc6a8-201ENSMUST00000033752 3964 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx1P63006 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx1P63006 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx1P63006 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Lhx1P63006 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx1P63006 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx1P63006 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Lhx1P63006 Gm9431-201ENSMUST00000119765 1051 ntBASIC12.72□□□□□ -0.37
Lhx1P63006 Gm11793-201ENSMUST00000120433 981 ntBASIC12.72□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms