Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Tpm1P58771 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Ttc14-201ENSMUST00000099153 9661 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Abcc10-201ENSMUST00000047970 4885 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC14.48□□□□□ -0.09
Tpm1P58771 Gm42863-201ENSMUST00000197875 2958 ntBASIC14.48□□□□□ -0.09
Tpm1P58771 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Tpm1P58771 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC14.48□□□□□ -0.09
Tpm1P58771 Lhx6-201ENSMUST00000112960 3345 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Tpm1P58771 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Tpm1P58771 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.47□□□□□ -0.09
Tpm1P58771 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.47□□□□□ -0.09
Tpm1P58771 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Maml3-201ENSMUST00000118075 5450 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC14.47□□□□□ -0.09
Tpm1P58771 Gm42706-201ENSMUST00000199733 1910 ntBASIC14.47□□□□□ -0.09
Tpm1P58771 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Pggt1b-201ENSMUST00000025354 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tpm1P58771 Tfe3-205ENSMUST00000115678 2658 ntTSL 5 BASIC14.47□□□□□ -0.09
Tpm1P58771 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Gm14822-201ENSMUST00000122247 291 ntBASIC14.47□□□□□ -0.09
Tpm1P58771 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.47□□□□□ -0.09
Tpm1P58771 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.47□□□□□ -0.09
Tpm1P58771 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC14.47□□□□□ -0.09
Tpm1P58771 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC14.47□□□□□ -0.09
Tpm1P58771 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.47□□□□□ -0.09
Tpm1P58771 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tpm1P58771 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.47□□□□□ -0.09
Tpm1P58771 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Tpm1P58771 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Tpm1P58771 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.47□□□□□ -0.09
Tpm1P58771 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Armcx2-201ENSMUST00000035559 3384 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Tpm1P58771 Tmem178b-201ENSMUST00000061740 3178 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Tpm1P58771 Csrnp1-204ENSMUST00000215916 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Nupl1-206ENSMUST00000225111 2936 ntBASIC14.46□□□□□ -0.09
Tpm1P58771 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Adra1a-206ENSMUST00000225182 2337 ntBASIC14.46□□□□□ -0.09
Tpm1P58771 Arhgap31-201ENSMUST00000023487 7964 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.46□□□□□ -0.09
Tpm1P58771 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC14.46□□□□□ -0.09
Tpm1P58771 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.46□□□□□ -0.09
Tpm1P58771 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Tpm1P58771 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.46□□□□□ -0.09
Tpm1P58771 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.46□□□□□ -0.09
Tpm1P58771 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.46□□□□□ -0.09
Tpm1P58771 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Tpm1P58771 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Cd33-202ENSMUST00000039861 1791 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Tkfc-201ENSMUST00000037678 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
Tpm1P58771 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tpm1P58771 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tpm1P58771 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.1
Tpm1P58771 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tpm1P58771 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tpm1P58771 E2f3-201ENSMUST00000102948 5097 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tpm1P58771 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tpm1P58771 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Tpm1P58771 Tenm3-206ENSMUST00000190840 8663 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tpm1P58771 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 56.9 ms