Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gm14701-201ENSMUST00000117156 348 ntBASIC10.49□□□□□ -0.73
Sssca1P56873 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC10.49□□□□□ -0.73
Sssca1P56873 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC10.49□□□□□ -0.73
Sssca1P56873 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Sssca1P56873 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC10.49□□□□□ -0.73
Sssca1P56873 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC10.49□□□□□ -0.73
Sssca1P56873 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sssca1P56873 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sssca1P56873 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sssca1P56873 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sssca1P56873 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sssca1P56873 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sssca1P56873 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC10.49□□□□□ -0.73
Sssca1P56873 Gpr176-201ENSMUST00000039160 3899 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sssca1P56873 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sssca1P56873 Gm43045-201ENSMUST00000198725 2095 ntBASIC10.49□□□□□ -0.73
Sssca1P56873 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sssca1P56873 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.49□□□□□ -0.73
Sssca1P56873 Ttbk2-202ENSMUST00000057135 11066 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sssca1P56873 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC10.49□□□□□ -0.73
Sssca1P56873 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sssca1P56873 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sssca1P56873 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.49□□□□□ -0.73
Sssca1P56873 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sssca1P56873 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sssca1P56873 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sssca1P56873 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC10.49□□□□□ -0.73
Sssca1P56873 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Spg11-201ENSMUST00000036450 7671 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC10.48□□□□□ -0.73
Sssca1P56873 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Sssca1P56873 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Pcdhb16-201ENSMUST00000051442 5225 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Sssca1P56873 AC122228.1-201ENSMUST00000223113 2057 ntTSL 5 BASIC10.48□□□□□ -0.73
Sssca1P56873 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Sssca1P56873 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
Sssca1P56873 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Pcdha2-202ENSMUST00000195590 4645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Gm3052-202ENSMUST00000188254 2224 ntBASIC10.48□□□□□ -0.73
Sssca1P56873 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.48□□□□□ -0.73
Sssca1P56873 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Sssca1P56873 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Gm26308-201ENSMUST00000157768 69 ntBASIC10.48□□□□□ -0.73
Sssca1P56873 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC10.48□□□□□ -0.73
Sssca1P56873 Gm6736-201ENSMUST00000166583 948 ntBASIC10.48□□□□□ -0.73
Sssca1P56873 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC10.48□□□□□ -0.73
Sssca1P56873 Gm7775-201ENSMUST00000218871 853 ntBASIC10.48□□□□□ -0.73
Sssca1P56873 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Sssca1P56873 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC10.48□□□□□ -0.73
Sssca1P56873 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 E2f7-209ENSMUST00000174857 2865 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Sssca1P56873 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
Sssca1P56873 Ppp1r15a-201ENSMUST00000042105 2333 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Nhlrc2-201ENSMUST00000071423 3934 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Dlc1-201ENSMUST00000033923 6159 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.47□□□□□ -0.73
Sssca1P56873 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Sssca1P56873 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.47□□□□□ -0.73
Sssca1P56873 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Gba-202ENSMUST00000167998 1938 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Sssca1P56873 Crybg3-201ENSMUST00000044604 5231 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms