Protein–RNA interactions for Protein: P56563

Lim2, Lens fiber membrane intrinsic protein, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lim2P56563 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.98□□□□□ -0.33
Lim2P56563 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lim2P56563 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lim2P56563 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lim2P56563 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.98□□□□□ -0.33
Lim2P56563 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lim2P56563 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lim2P56563 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lim2P56563 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lim2P56563 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Lim2P56563 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.98□□□□□ -0.33
Lim2P56563 Atpif1-203ENSMUST00000152993 462 ntTSL 2 BASIC12.98□□□□□ -0.33
Lim2P56563 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC12.98□□□□□ -0.33
Lim2P56563 Gm28693-202ENSMUST00000190758 331 ntBASIC12.98□□□□□ -0.33
Lim2P56563 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.98□□□□□ -0.33
Lim2P56563 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lim2P56563 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC12.98□□□□□ -0.33
Lim2P56563 Gm6458-201ENSMUST00000211573 635 ntBASIC12.98□□□□□ -0.33
Lim2P56563 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lim2P56563 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Lim2P56563 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lim2P56563 Slc7a7-206ENSMUST00000197440 2278 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lim2P56563 Oxr1-204ENSMUST00000110297 4596 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lim2P56563 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lim2P56563 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Lim2P56563 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.98□□□□□ -0.33
Lim2P56563 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lim2P56563 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lim2P56563 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lim2P56563 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Lim2P56563 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Lim2P56563 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.97□□□□□ -0.33
Lim2P56563 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lim2P56563 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC12.97□□□□□ -0.33
Lim2P56563 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Gm12384-201ENSMUST00000119228 919 ntBASIC12.97□□□□□ -0.33
Lim2P56563 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lim2P56563 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC12.97□□□□□ -0.33
Lim2P56563 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.97□□□□□ -0.33
Lim2P56563 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Lim2P56563 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Lim2P56563 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Lim2P56563 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.97□□□□□ -0.33
Lim2P56563 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Pyroxd1-201ENSMUST00000041852 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.97□□□□□ -0.33
Lim2P56563 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Lim2P56563 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.97□□□□□ -0.33
Lim2P56563 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lim2P56563 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Lim2P56563 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lim2P56563 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Lim2P56563 Eps8l3-201ENSMUST00000037375 2271 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lim2P56563 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lim2P56563 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lim2P56563 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lim2P56563 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lim2P56563 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.96□□□□□ -0.33
Lim2P56563 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Lim2P56563 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lim2P56563 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.96□□□□□ -0.33
Lim2P56563 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lim2P56563 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lim2P56563 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lim2P56563 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lim2P56563 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.96□□□□□ -0.33
Lim2P56563 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.96□□□□□ -0.33
Lim2P56563 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lim2P56563 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lim2P56563 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC12.96□□□□□ -0.33
Lim2P56563 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.96□□□□□ -0.33
Lim2P56563 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.96□□□□□ -0.33
Lim2P56563 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Lim2P56563 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lim2P56563 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lim2P56563 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Lim2P56563 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lim2P56563 Otud6a-201ENSMUST00000060241 873 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lim2P56563 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Lim2P56563 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 64 ms