Protein–RNA interactions for Protein: P55097

Ctsk, Cathepsin K, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CtskP55097 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC12.78□□□□□ -0.36
CtskP55097 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CtskP55097 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 Gm37592-201ENSMUST00000192741 373 ntTSL 5 BASIC12.78□□□□□ -0.36
CtskP55097 Gm43822-201ENSMUST00000200285 476 ntBASIC12.78□□□□□ -0.36
CtskP55097 CT009713.10-202ENSMUST00000225734 696 ntBASIC12.78□□□□□ -0.36
CtskP55097 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CtskP55097 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CtskP55097 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.78□□□□□ -0.36
CtskP55097 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CtskP55097 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.78□□□□□ -0.36
CtskP55097 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.77□□□□□ -0.36
CtskP55097 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CtskP55097 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CtskP55097 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CtskP55097 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CtskP55097 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.77□□□□□ -0.36
CtskP55097 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CtskP55097 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CtskP55097 AC154849.3-201ENSMUST00000223733 1660 ntBASIC12.77□□□□□ -0.36
CtskP55097 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CtskP55097 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CtskP55097 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CtskP55097 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
CtskP55097 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
CtskP55097 Gm11793-201ENSMUST00000120433 981 ntBASIC12.77□□□□□ -0.37
CtskP55097 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.77□□□□□ -0.37
CtskP55097 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC12.77□□□□□ -0.37
CtskP55097 Gm25261-201ENSMUST00000157416 134 ntBASIC12.77□□□□□ -0.37
CtskP55097 C87198-201ENSMUST00000173553 1045 ntTSL 3 BASIC12.77□□□□□ -0.37
CtskP55097 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
CtskP55097 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC12.77□□□□□ -0.37
CtskP55097 Gm10729-202ENSMUST00000193403 1375 ntBASIC12.77□□□□□ -0.37
CtskP55097 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CtskP55097 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtskP55097 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtskP55097 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC12.76□□□□□ -0.37
CtskP55097 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CtskP55097 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CtskP55097 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtskP55097 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtskP55097 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.76□□□□□ -0.37
CtskP55097 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtskP55097 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtskP55097 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtskP55097 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtskP55097 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtskP55097 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtskP55097 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtskP55097 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
CtskP55097 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC12.76□□□□□ -0.37
CtskP55097 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.76□□□□□ -0.37
CtskP55097 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC12.76□□□□□ -0.37
CtskP55097 Gm44069-201ENSMUST00000204898 506 ntBASIC12.76□□□□□ -0.37
CtskP55097 Gm4935-201ENSMUST00000221316 1198 ntBASIC12.76□□□□□ -0.37
CtskP55097 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtskP55097 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtskP55097 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CtskP55097 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CtskP55097 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CtskP55097 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms