Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC13.2□□□□□ -0.3
Sox1P53783 Gm15573-201ENSMUST00000119487 540 ntBASIC13.2□□□□□ -0.3
Sox1P53783 Vps25-205ENSMUST00000121331 790 ntTSL 2 BASIC13.2□□□□□ -0.3
Sox1P53783 Gm12130-201ENSMUST00000133599 639 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox1P53783 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC13.2□□□□□ -0.3
Sox1P53783 Ndufa2-201ENSMUST00000014438 572 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox1P53783 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox1P53783 Gm28071-201ENSMUST00000190355 478 ntBASIC13.2□□□□□ -0.3
Sox1P53783 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC13.2□□□□□ -0.3
Sox1P53783 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox1P53783 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC13.2□□□□□ -0.3
Sox1P53783 AC153505.1-201ENSMUST00000218819 1071 ntBASIC13.2□□□□□ -0.3
Sox1P53783 Gm9111-201ENSMUST00000219394 709 ntBASIC13.2□□□□□ -0.3
Sox1P53783 AC159205.5-202ENSMUST00000224849 386 ntBASIC13.2□□□□□ -0.3
Sox1P53783 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox1P53783 Ginm1-202ENSMUST00000065124 300 ntBASIC13.2□□□□□ -0.3
Sox1P53783 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC13.2□□□□□ -0.3
Sox1P53783 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox1P53783 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox1P53783 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.2□□□□□ -0.3
Sox1P53783 Zfp809-201ENSMUST00000072465 1425 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox1P53783 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Sox1P53783 Gm2673-201ENSMUST00000120958 1608 ntBASIC13.2□□□□□ -0.3
Sox1P53783 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.2□□□□□ -0.3
Sox1P53783 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Sox1P53783 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sox1P53783 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Sox1P53783 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Sox1P53783 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC13.2□□□□□ -0.3
Sox1P53783 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Sox1P53783 Gm38355-201ENSMUST00000192514 1570 ntBASIC13.2□□□□□ -0.3
Sox1P53783 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC13.2□□□□□ -0.3
Sox1P53783 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.19□□□□□ -0.3
Sox1P53783 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.19□□□□□ -0.3
Sox1P53783 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Gm12015-201ENSMUST00000117065 843 ntBASIC13.19□□□□□ -0.3
Sox1P53783 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Gm11354-201ENSMUST00000121974 422 ntBASIC13.19□□□□□ -0.3
Sox1P53783 1810021B22Rik-201ENSMUST00000150364 652 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Gm22138-201ENSMUST00000158748 128 ntBASIC13.19□□□□□ -0.3
Sox1P53783 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC13.19□□□□□ -0.3
Sox1P53783 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sox1P53783 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sox1P53783 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sox1P53783 Gm13279-201ENSMUST00000178602 549 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sox1P53783 Gm13289-201ENSMUST00000179158 549 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sox1P53783 Gm13276-201ENSMUST00000179372 549 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sox1P53783 Gm13287-201ENSMUST00000179490 549 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sox1P53783 Gm38092-201ENSMUST00000195600 653 ntBASIC13.19□□□□□ -0.3
Sox1P53783 Washc3-201ENSMUST00000020248 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 AA545190-201ENSMUST00000203495 1053 ntTSL 2 BASIC13.19□□□□□ -0.3
Sox1P53783 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC13.19□□□□□ -0.3
Sox1P53783 CT009713.8-201ENSMUST00000225448 560 ntBASIC13.19□□□□□ -0.3
Sox1P53783 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sox1P53783 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Gm13271-201ENSMUST00000094992 549 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Sox1P53783 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Sox1P53783 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Sox1P53783 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sox1P53783 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Sox1P53783 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Sox1P53783 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sox1P53783 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Sox1P53783 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Sox1P53783 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sox1P53783 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.18□□□□□ -0.3
Sox1P53783 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Sox1P53783 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Zfp503-201ENSMUST00000043409 4216 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Sox1P53783 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.18□□□□□ -0.3
Sox1P53783 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.18□□□□□ -0.3
Sox1P53783 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Sox1P53783 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms