Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
Pdx1P52946 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.84□□□□□ -0.35
Pdx1P52946 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC12.84□□□□□ -0.35
Pdx1P52946 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.84□□□□□ -0.35
Pdx1P52946 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC12.84□□□□□ -0.35
Pdx1P52946 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdx1P52946 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.83□□□□□ -0.35
Pdx1P52946 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
Pdx1P52946 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.83□□□□□ -0.36
Pdx1P52946 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdx1P52946 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdx1P52946 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pdx1P52946 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
Pdx1P52946 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pdx1P52946 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdx1P52946 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.83□□□□□ -0.36
Pdx1P52946 Gm7029-201ENSMUST00000173226 450 ntBASIC12.83□□□□□ -0.36
Pdx1P52946 Gm38230-201ENSMUST00000193572 1159 ntBASIC12.83□□□□□ -0.36
Pdx1P52946 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pdx1P52946 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pdx1P52946 AC166051.1-201ENSMUST00000214313 210 ntBASIC12.83□□□□□ -0.36
Pdx1P52946 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdx1P52946 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC12.83□□□□□ -0.36
Pdx1P52946 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdx1P52946 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdx1P52946 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdx1P52946 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Pdx1P52946 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Pdx1P52946 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdx1P52946 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdx1P52946 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdx1P52946 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdx1P52946 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdx1P52946 Gm7002-201ENSMUST00000221386 2165 ntBASIC12.83□□□□□ -0.36
Pdx1P52946 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdx1P52946 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pdx1P52946 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 1110002L01Rik-202ENSMUST00000168012 3569 ntTSL 2 BASIC12.82□□□□□ -0.36
Pdx1P52946 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Pdx1P52946 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.82□□□□□ -0.36
Pdx1P52946 Gm5896-201ENSMUST00000189662 1024 ntBASIC12.82□□□□□ -0.36
Pdx1P52946 5330425B07Rik-201ENSMUST00000196714 1027 ntBASIC12.82□□□□□ -0.36
Pdx1P52946 Gm9299-201ENSMUST00000206392 1140 ntBASIC12.82□□□□□ -0.36
Pdx1P52946 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.82□□□□□ -0.36
Pdx1P52946 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pdx1P52946 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 Cad-206ENSMUST00000201838 3153 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.82□□□□□ -0.36
Pdx1P52946 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pdx1P52946 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.81□□□□□ -0.36
Pdx1P52946 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Pdx1P52946 Gm10544-201ENSMUST00000180516 2239 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.81□□□□□ -0.36
Pdx1P52946 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC12.81□□□□□ -0.36
Pdx1P52946 Gm2231-201ENSMUST00000125661 612 ntBASIC12.81□□□□□ -0.36
Pdx1P52946 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Pdx1P52946 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC12.81□□□□□ -0.36
Pdx1P52946 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Pdx1P52946 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Pdx1P52946 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms