Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 Gm2467-201ENSMUST00000182266 1010 ntBASIC13.72□□□□□ -0.21
Shmt1P50431 Gm6981-201ENSMUST00000182467 1008 ntBASIC13.72□□□□□ -0.21
Shmt1P50431 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC13.72□□□□□ -0.21
Shmt1P50431 Gm38002-201ENSMUST00000193255 180 ntBASIC13.72□□□□□ -0.21
Shmt1P50431 Gm6013-201ENSMUST00000212264 699 ntBASIC13.72□□□□□ -0.21
Shmt1P50431 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shmt1P50431 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shmt1P50431 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shmt1P50431 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Shmt1P50431 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Shmt1P50431 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shmt1P50431 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Shmt1P50431 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.72□□□□□ -0.21
Shmt1P50431 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.71□□□□□ -0.21
Shmt1P50431 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Shmt1P50431 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shmt1P50431 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Shmt1P50431 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shmt1P50431 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Shmt1P50431 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shmt1P50431 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shmt1P50431 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Shmt1P50431 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Shmt1P50431 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.71□□□□□ -0.21
Shmt1P50431 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.71□□□□□ -0.21
Shmt1P50431 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shmt1P50431 Gm9431-201ENSMUST00000119765 1051 ntBASIC13.71□□□□□ -0.21
Shmt1P50431 Rab11fip4os2-201ENSMUST00000123067 689 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Shmt1P50431 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shmt1P50431 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shmt1P50431 Rassf8-202ENSMUST00000058538 1131 ntBASIC13.71□□□□□ -0.21
Shmt1P50431 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Shmt1P50431 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Shmt1P50431 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shmt1P50431 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Shmt1P50431 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Shmt1P50431 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shmt1P50431 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC13.71□□□□□ -0.22
Shmt1P50431 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Shmt1P50431 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
Shmt1P50431 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shmt1P50431 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shmt1P50431 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Shmt1P50431 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.71□□□□□ -0.22
Shmt1P50431 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC13.71□□□□□ -0.22
Shmt1P50431 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.7□□□□□ -0.22
Shmt1P50431 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Shmt1P50431 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.7□□□□□ -0.22
Shmt1P50431 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC13.7□□□□□ -0.22
Shmt1P50431 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Shmt1P50431 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
Shmt1P50431 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.7□□□□□ -0.22
Shmt1P50431 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.7□□□□□ -0.22
Shmt1P50431 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.7□□□□□ -0.22
Shmt1P50431 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Dnal4-202ENSMUST00000069877 1011 ntTSL 5 BASIC13.7□□□□□ -0.22
Shmt1P50431 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Shmt1P50431 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.7□□□□□ -0.22
Shmt1P50431 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Shmt1P50431 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Shmt1P50431 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.69□□□□□ -0.22
Shmt1P50431 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 4930429D17Rik-201ENSMUST00000198193 1624 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC13.69□□□□□ -0.22
Shmt1P50431 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Shmt1P50431 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms