Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
GdnfP48540 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
GdnfP48540 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.4□□□□□ -0.59
GdnfP48540 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
GdnfP48540 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
GdnfP48540 Hook2-204ENSMUST00000210326 3080 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.39□□□□□ -0.59
GdnfP48540 Pcnx2-201ENSMUST00000047239 7236 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
GdnfP48540 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
GdnfP48540 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Gm44855-201ENSMUST00000205725 362 ntBASIC11.39□□□□□ -0.59
GdnfP48540 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
GdnfP48540 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC11.39□□□□□ -0.59
GdnfP48540 Gm17795-201ENSMUST00000214505 757 ntBASIC11.39□□□□□ -0.59
GdnfP48540 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Gm5626-201ENSMUST00000222151 1058 ntBASIC11.39□□□□□ -0.59
GdnfP48540 AC164426.2-201ENSMUST00000225993 2492 ntBASIC11.39□□□□□ -0.59
GdnfP48540 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Rrnad1-201ENSMUST00000005016 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Gm9797-201ENSMUST00000052902 613 ntBASIC11.39□□□□□ -0.59
GdnfP48540 Rnf182-201ENSMUST00000059986 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
GdnfP48540 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.39□□□□□ -0.59
GdnfP48540 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC11.39□□□□□ -0.59
GdnfP48540 Pomgnt1-205ENSMUST00000121052 2693 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
GdnfP48540 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC11.39□□□□□ -0.59
GdnfP48540 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Abo-201ENSMUST00000102900 1779 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
GdnfP48540 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Glp2r-202ENSMUST00000051765 4873 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Epha5-202ENSMUST00000113398 4830 ntTSL 5 BASIC11.38□□□□□ -0.59
GdnfP48540 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC11.38□□□□□ -0.59
GdnfP48540 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
GdnfP48540 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Gm22189-201ENSMUST00000103822 86 ntBASIC11.38□□□□□ -0.59
GdnfP48540 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC11.38□□□□□ -0.59
GdnfP48540 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC11.38□□□□□ -0.59
GdnfP48540 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC11.38□□□□□ -0.59
GdnfP48540 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC11.38□□□□□ -0.59
GdnfP48540 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
GdnfP48540 Gm6473-201ENSMUST00000188572 1210 ntBASIC11.38□□□□□ -0.59
GdnfP48540 Gm45195-201ENSMUST00000205597 1008 ntBASIC11.38□□□□□ -0.59
GdnfP48540 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC11.38□□□□□ -0.59
GdnfP48540 Gm6218-201ENSMUST00000219812 628 ntBASIC11.38□□□□□ -0.59
GdnfP48540 AC139580.1-202ENSMUST00000223574 928 ntBASIC11.38□□□□□ -0.59
GdnfP48540 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Gm2423-201ENSMUST00000074863 733 ntBASIC11.38□□□□□ -0.59
GdnfP48540 Hist1h2al-201ENSMUST00000091708 339 ntBASIC11.38□□□□□ -0.59
GdnfP48540 Cdc7-203ENSMUST00000117196 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Slc35e2-202ENSMUST00000105608 6291 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
GdnfP48540 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC11.38□□□□□ -0.59
GdnfP48540 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC11.38□□□□□ -0.59
GdnfP48540 Capn2-201ENSMUST00000068505 3225 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Etf1-201ENSMUST00000025218 3709 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
GdnfP48540 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
GdnfP48540 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms