Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rfx3P48381 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Sun2-202ENSMUST00000089311 3709 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.74□□□□□ -0.53
Rfx3P48381 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Rfx3P48381 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Rfx3P48381 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 AC241621.2-201ENSMUST00000223991 2151 ntBASIC11.74□□□□□ -0.53
Rfx3P48381 Ltbp2-202ENSMUST00000110254 6602 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Senp3-201ENSMUST00000005336 2313 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Rfx3P48381 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Tspoap1-201ENSMUST00000039627 7616 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
Rfx3P48381 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Rfx3P48381 Ldha-ps-201ENSMUST00000119390 995 ntBASIC11.73□□□□□ -0.53
Rfx3P48381 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Rfx3P48381 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Rfx3P48381 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC11.73□□□□□ -0.53
Rfx3P48381 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.73□□□□□ -0.53
Rfx3P48381 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC11.73□□□□□ -0.53
Rfx3P48381 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC11.73□□□□□ -0.53
Rfx3P48381 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC11.73□□□□□ -0.53
Rfx3P48381 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Gm28631-201ENSMUST00000190740 334 ntBASIC11.73□□□□□ -0.53
Rfx3P48381 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Gm37105-201ENSMUST00000192251 2085 ntBASIC11.73□□□□□ -0.53
Rfx3P48381 Gm38223-201ENSMUST00000194484 695 ntBASIC11.73□□□□□ -0.53
Rfx3P48381 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Gm44401-201ENSMUST00000204462 2375 ntBASIC11.73□□□□□ -0.53
Rfx3P48381 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Klk2-ps-202ENSMUST00000206865 2684 ntTSL 5 BASIC11.73□□□□□ -0.53
Rfx3P48381 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC11.73□□□□□ -0.53
Rfx3P48381 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC11.73□□□□□ -0.53
Rfx3P48381 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC11.73□□□□□ -0.53
Rfx3P48381 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
Rfx3P48381 Washc5-201ENSMUST00000022976 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Calcoco1-201ENSMUST00000023818 2822 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Thtpa-201ENSMUST00000050575 2830 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Rfx3P48381 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Rfx3P48381 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Rfx3P48381 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 AC154527.2-201ENSMUST00000225256 1466 ntBASIC11.72□□□□□ -0.53
Rfx3P48381 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Prrx2-202ENSMUST00000113592 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Gm12416-201ENSMUST00000120911 1008 ntBASIC11.72□□□□□ -0.53
Rfx3P48381 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC11.72□□□□□ -0.53
Rfx3P48381 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Mir7221-201ENSMUST00000184009 72 ntBASIC11.72□□□□□ -0.53
Rfx3P48381 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.72□□□□□ -0.53
Rfx3P48381 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 AC154687.2-201ENSMUST00000223853 640 ntBASIC11.72□□□□□ -0.53
Rfx3P48381 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC11.72□□□□□ -0.53
Rfx3P48381 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.72□□□□□ -0.53
Rfx3P48381 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC11.72□□□□□ -0.53
Rfx3P48381 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Apol7c-201ENSMUST00000062562 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Rfx3P48381 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms