Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx2P48379 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx2P48379 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx2P48379 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx2P48379 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rfx2P48379 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx2P48379 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC13.62□□□□□ -0.23
Rfx2P48379 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx2P48379 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx2P48379 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx2P48379 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx2P48379 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx2P48379 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx2P48379 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx2P48379 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rfx2P48379 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rfx2P48379 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rfx2P48379 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rfx2P48379 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
Rfx2P48379 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Dnase1l1-203ENSMUST00000114189 755 ntTSL 3 BASIC13.61□□□□□ -0.23
Rfx2P48379 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC13.61□□□□□ -0.23
Rfx2P48379 Gm26728-201ENSMUST00000185268 595 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.61□□□□□ -0.23
Rfx2P48379 Gm37008-201ENSMUST00000195712 319 ntBASIC13.61□□□□□ -0.23
Rfx2P48379 Gm42627-201ENSMUST00000197347 224 ntBASIC13.61□□□□□ -0.23
Rfx2P48379 Gm43179-201ENSMUST00000198797 275 ntBASIC13.61□□□□□ -0.23
Rfx2P48379 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.61□□□□□ -0.23
Rfx2P48379 Gm19309-201ENSMUST00000218295 205 ntBASIC13.61□□□□□ -0.23
Rfx2P48379 Gm10146-201ENSMUST00000072739 309 ntBASIC13.61□□□□□ -0.23
Rfx2P48379 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rfx2P48379 Olfr582-201ENSMUST00000098212 960 ntBASIC13.61□□□□□ -0.23
Rfx2P48379 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.61□□□□□ -0.23
Rfx2P48379 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.61□□□□□ -0.23
Rfx2P48379 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.61□□□□□ -0.23
Rfx2P48379 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rfx2P48379 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.61□□□□□ -0.23
Rfx2P48379 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rfx2P48379 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx2P48379 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx2P48379 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx2P48379 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx2P48379 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx2P48379 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC13.6□□□□□ -0.23
Rfx2P48379 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rfx2P48379 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx2P48379 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
Rfx2P48379 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rfx2P48379 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx2P48379 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx2P48379 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC13.6□□□□□ -0.23
Rfx2P48379 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.6□□□□□ -0.23
Rfx2P48379 AC134254.1-201ENSMUST00000221362 167 ntBASIC13.6□□□□□ -0.23
Rfx2P48379 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx2P48379 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx2P48379 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx2P48379 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx2P48379 Snora73a-201ENSMUST00000082453 205 ntBASIC13.6□□□□□ -0.23
Rfx2P48379 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rfx2P48379 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.6□□□□□ -0.23
Rfx2P48379 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.59□□□□□ -0.23
Rfx2P48379 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.59□□□□□ -0.23
Rfx2P48379 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx2P48379 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx2P48379 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Rfx2P48379 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx2P48379 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx2P48379 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC13.59□□□□□ -0.23
Rfx2P48379 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC13.59□□□□□ -0.23
Rfx2P48379 Gm38002-201ENSMUST00000193255 180 ntBASIC13.59□□□□□ -0.23
Rfx2P48379 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx2P48379 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx2P48379 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.59□□□□□ -0.23
Rfx2P48379 AC133598.1-201ENSMUST00000224327 660 ntBASIC13.59□□□□□ -0.23
Rfx2P48379 CU024892.2-201ENSMUST00000224608 832 ntBASIC13.59□□□□□ -0.23
Rfx2P48379 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rfx2P48379 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 59.2 ms