Protein–RNA interactions for Protein: P40224

Cxcl12, Stromal cell-derived factor 1, mousemouse

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl12P40224 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cxcl12P40224 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cxcl12P40224 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC13.29□□□□□ -0.28
Cxcl12P40224 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC13.28□□□□□ -0.28
Cxcl12P40224 Gm14460-201ENSMUST00000121511 639 ntBASIC13.28□□□□□ -0.28
Cxcl12P40224 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Gm11815-201ENSMUST00000139423 708 ntTSL 5 BASIC13.28□□□□□ -0.28
Cxcl12P40224 Gm17040-201ENSMUST00000168672 548 ntTSL 3 BASIC13.28□□□□□ -0.28
Cxcl12P40224 Gm43916-201ENSMUST00000205062 967 ntBASIC13.28□□□□□ -0.28
Cxcl12P40224 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC13.28□□□□□ -0.28
Cxcl12P40224 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 AC127270.1-201ENSMUST00000221441 491 ntTSL 3 BASIC13.28□□□□□ -0.28
Cxcl12P40224 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 1700128F08Rik-201ENSMUST00000034483 1110 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Cxcl12P40224 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Cxcl12P40224 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC13.28□□□□□ -0.28
Cxcl12P40224 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.28□□□□□ -0.28
Cxcl12P40224 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cxcl12P40224 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
Cxcl12P40224 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl12P40224 Esam-201ENSMUST00000002011 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl12P40224 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl12P40224 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl12P40224 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl12P40224 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl12P40224 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl12P40224 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.27□□□□□ -0.28
Cxcl12P40224 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Cxcl12P40224 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl12P40224 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl12P40224 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl12P40224 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl12P40224 Gm14058-201ENSMUST00000116082 735 ntBASIC13.27□□□□□ -0.29
Cxcl12P40224 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.27□□□□□ -0.29
Cxcl12P40224 Rps2-ps4-201ENSMUST00000121977 633 ntBASIC13.27□□□□□ -0.29
Cxcl12P40224 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl12P40224 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC13.27□□□□□ -0.29
Cxcl12P40224 Scgb1b19-201ENSMUST00000165813 418 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cxcl12P40224 Gm6407-201ENSMUST00000176468 549 ntBASIC13.27□□□□□ -0.29
Cxcl12P40224 Scgb1b3-201ENSMUST00000179481 419 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl12P40224 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl12P40224 Gm29155-201ENSMUST00000185910 269 ntBASIC13.27□□□□□ -0.29
Cxcl12P40224 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.27□□□□□ -0.29
Cxcl12P40224 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC13.27□□□□□ -0.29
Cxcl12P40224 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC13.27□□□□□ -0.29
Cxcl12P40224 Gm8365-201ENSMUST00000197334 648 ntBASIC13.27□□□□□ -0.29
Cxcl12P40224 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Cxcl12P40224 AC166992.1-201ENSMUST00000216356 565 ntBASIC13.27□□□□□ -0.29
Cxcl12P40224 Gm5369-201ENSMUST00000217499 588 ntBASIC13.27□□□□□ -0.29
Cxcl12P40224 Calca-201ENSMUST00000032906 994 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl12P40224 Defb36-201ENSMUST00000058086 468 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl12P40224 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl12P40224 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl12P40224 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl12P40224 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl12P40224 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Cxcl12P40224 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl12P40224 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl12P40224 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Cxcl12P40224 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl12P40224 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Cxcl12P40224 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.29
Cxcl12P40224 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl12P40224 Mfsd4a-204ENSMUST00000126927 2422 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Cxcl12P40224 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC13.26□□□□□ -0.29
Cxcl12P40224 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cxcl12P40224 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.26□□□□□ -0.29
Cxcl12P40224 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
Cxcl12P40224 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC13.26□□□□□ -0.29
Cxcl12P40224 Gm14921-201ENSMUST00000118643 908 ntBASIC13.26□□□□□ -0.29
Cxcl12P40224 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.26□□□□□ -0.29
Cxcl12P40224 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.26□□□□□ -0.29
Cxcl12P40224 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Cxcl12P40224 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 33.8 ms