Protein–RNA interactions for Protein: P39689

Cdkn1a, Cyclin-dependent kinase inhibitor 1, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn1aP39689 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Matn2-206ENSMUST00000228570 2798 ntBASIC10.7□□□□□ -0.7
Cdkn1aP39689 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Gm14704-201ENSMUST00000120300 874 ntBASIC10.7□□□□□ -0.7
Cdkn1aP39689 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Gm38319-201ENSMUST00000194537 1266 ntBASIC10.7□□□□□ -0.7
Cdkn1aP39689 Gm38266-201ENSMUST00000194931 421 ntBASIC10.7□□□□□ -0.7
Cdkn1aP39689 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.7□□□□□ -0.7
Cdkn1aP39689 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.7□□□□□ -0.7
Cdkn1aP39689 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.7□□□□□ -0.7
Cdkn1aP39689 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Cdkn1aP39689 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Dnajb5-203ENSMUST00000098112 3093 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Nr2f1-203ENSMUST00000127137 991 ntTSL 5 BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Mir8109-201ENSMUST00000184375 117 ntBASIC10.69□□□□□ -0.7
Cdkn1aP39689 Gm29396-201ENSMUST00000185659 716 ntBASIC10.69□□□□□ -0.7
Cdkn1aP39689 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Ighv8-10-201ENSMUST00000199579 358 ntBASIC10.69□□□□□ -0.7
Cdkn1aP39689 Olfr284-202ENSMUST00000206647 966 ntBASIC10.69□□□□□ -0.7
Cdkn1aP39689 Rfxank-203ENSMUST00000212320 1121 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Gm32025-201ENSMUST00000217960 307 ntBASIC10.69□□□□□ -0.7
Cdkn1aP39689 AC069562.3-201ENSMUST00000225387 587 ntBASIC10.69□□□□□ -0.7
Cdkn1aP39689 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Cdkn1aP39689 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdkn1aP39689 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdkn1aP39689 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Cdkn1aP39689 CT009713.10-201ENSMUST00000225013 1986 ntBASIC10.68□□□□□ -0.7
Cdkn1aP39689 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdkn1aP39689 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Cdkn1aP39689 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC10.68□□□□□ -0.7
Cdkn1aP39689 Gm44291-201ENSMUST00000203102 2865 ntBASIC10.68□□□□□ -0.7
Cdkn1aP39689 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 39.6 ms