Protein–RNA interactions for Protein: P38575

Upk2, Uroplakin-2, mousemouse

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk2P38575 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Upk2P38575 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
Upk2P38575 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Upk2P38575 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.38□□□□□ -0.59
Upk2P38575 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.38□□□□□ -0.59
Upk2P38575 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC11.38□□□□□ -0.59
Upk2P38575 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Upk2P38575 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Pir-201ENSMUST00000033749 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.37□□□□□ -0.59
Upk2P38575 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.37□□□□□ -0.59
Upk2P38575 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.37□□□□□ -0.59
Upk2P38575 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.37□□□□□ -0.59
Upk2P38575 Gm11814-201ENSMUST00000119515 929 ntBASIC11.37□□□□□ -0.59
Upk2P38575 Gm12490-201ENSMUST00000120255 560 ntBASIC11.37□□□□□ -0.59
Upk2P38575 Gm12291-201ENSMUST00000121627 311 ntBASIC11.37□□□□□ -0.59
Upk2P38575 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC11.37□□□□□ -0.59
Upk2P38575 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Gm8810-201ENSMUST00000172895 754 ntBASIC11.37□□□□□ -0.59
Upk2P38575 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Gm28323-201ENSMUST00000186817 2499 ntBASIC11.37□□□□□ -0.59
Upk2P38575 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC11.37□□□□□ -0.59
Upk2P38575 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Gm13127-201ENSMUST00000118978 1389 ntBASIC11.37□□□□□ -0.59
Upk2P38575 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.37□□□□□ -0.59
Upk2P38575 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC11.37□□□□□ -0.59
Upk2P38575 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Upk2P38575 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Upk2P38575 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Upk2P38575 Gzf1-201ENSMUST00000028928 4232 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Zkscan3-207ENSMUST00000223831 2101 ntBASIC11.36□□□□□ -0.59
Upk2P38575 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC11.36□□□□□ -0.59
Upk2P38575 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.36□□□□□ -0.59
Upk2P38575 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
Upk2P38575 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Upk2P38575 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Upk2P38575 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Gm13813-201ENSMUST00000120998 787 ntBASIC11.36□□□□□ -0.59
Upk2P38575 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC11.36□□□□□ -0.59
Upk2P38575 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC11.36□□□□□ -0.59
Upk2P38575 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
Upk2P38575 Gm24196-201ENSMUST00000179161 110 ntBASIC11.36□□□□□ -0.59
Upk2P38575 Gm37497-201ENSMUST00000195830 798 ntBASIC11.36□□□□□ -0.59
Upk2P38575 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Upk2P38575 Gm45059-201ENSMUST00000205558 1077 ntBASIC11.36□□□□□ -0.59
Upk2P38575 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC11.36□□□□□ -0.59
Upk2P38575 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.36□□□□□ -0.59
Upk2P38575 Wdyhv1-206ENSMUST00000227142 786 ntBASIC11.36□□□□□ -0.59
Upk2P38575 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
Upk2P38575 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Upk2P38575 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms