Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.79□□□□□ -0.36
HmgclP38060 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HmgclP38060 AC154747.3-201ENSMUST00000224471 3470 ntBASIC12.79□□□□□ -0.36
HmgclP38060 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
HmgclP38060 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
HmgclP38060 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
HmgclP38060 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
HmgclP38060 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.78□□□□□ -0.36
HmgclP38060 Gm8131-201ENSMUST00000213783 1570 ntBASIC12.78□□□□□ -0.36
HmgclP38060 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HmgclP38060 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
HmgclP38060 Gm26185-201ENSMUST00000157692 266 ntBASIC12.78□□□□□ -0.36
HmgclP38060 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC12.78□□□□□ -0.36
HmgclP38060 Gm29127-201ENSMUST00000188304 517 ntBASIC12.78□□□□□ -0.36
HmgclP38060 Gm37042-201ENSMUST00000193816 581 ntBASIC12.78□□□□□ -0.36
HmgclP38060 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.78□□□□□ -0.36
HmgclP38060 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.78□□□□□ -0.36
HmgclP38060 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
HmgclP38060 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
HmgclP38060 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
HmgclP38060 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
HmgclP38060 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
HmgclP38060 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.77□□□□□ -0.36
HmgclP38060 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HmgclP38060 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HmgclP38060 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HmgclP38060 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.77□□□□□ -0.36
HmgclP38060 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
HmgclP38060 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HmgclP38060 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
HmgclP38060 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HmgclP38060 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
HmgclP38060 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
HmgclP38060 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
HmgclP38060 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
HmgclP38060 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
HmgclP38060 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.77□□□□□ -0.37
HmgclP38060 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC12.77□□□□□ -0.37
HmgclP38060 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
HmgclP38060 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.77□□□□□ -0.37
HmgclP38060 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 Gm17150-201ENSMUST00000165577 381 ntBASIC12.77□□□□□ -0.37
HmgclP38060 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.77□□□□□ -0.37
HmgclP38060 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
HmgclP38060 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
HmgclP38060 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
HmgclP38060 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 Arhgap10-202ENSMUST00000210519 2295 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC12.77□□□□□ -0.37
HmgclP38060 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
HmgclP38060 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
HmgclP38060 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 70.2 ms