Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Thbs1P35441 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Thbs1P35441 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.04□□□□□ -0.48
Thbs1P35441 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.04□□□□□ -0.48
Thbs1P35441 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.04□□□□□ -0.48
Thbs1P35441 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Thbs1P35441 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC12.04□□□□□ -0.48
Thbs1P35441 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Thbs1P35441 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Mir686-201ENSMUST00000102174 109 ntBASIC12.04□□□□□ -0.48
Thbs1P35441 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.04□□□□□ -0.48
Thbs1P35441 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Gm12091-201ENSMUST00000146791 830 ntBASIC12.04□□□□□ -0.48
Thbs1P35441 6530401F13Rik-201ENSMUST00000166971 1090 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Gm8463-201ENSMUST00000208573 613 ntBASIC12.04□□□□□ -0.48
Thbs1P35441 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Thbs1P35441 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.04□□□□□ -0.48
Thbs1P35441 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.04□□□□□ -0.48
Thbs1P35441 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Thbs1P35441 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Thbs1P35441 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.04□□□□□ -0.48
Thbs1P35441 Gm29500-201ENSMUST00000185992 1344 ntTSL 5 BASIC12.04□□□□□ -0.48
Thbs1P35441 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Thbs1P35441 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.03□□□□□ -0.48
Thbs1P35441 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.03□□□□□ -0.48
Thbs1P35441 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Thbs1P35441 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 Gm45253-201ENSMUST00000210694 2076 ntTSL 5 BASIC12.03□□□□□ -0.48
Thbs1P35441 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.03□□□□□ -0.48
Thbs1P35441 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.03□□□□□ -0.48
Thbs1P35441 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC12.03□□□□□ -0.48
Thbs1P35441 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.03□□□□□ -0.48
Thbs1P35441 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.03□□□□□ -0.48
Thbs1P35441 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Thbs1P35441 Olfr1248-201ENSMUST00000216129 1078 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Thbs1P35441 Cdk7-205ENSMUST00000225990 1159 ntBASIC12.03□□□□□ -0.48
Thbs1P35441 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Thbs1P35441 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 Gm25857-201ENSMUST00000082788 129 ntBASIC12.03□□□□□ -0.48
Thbs1P35441 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Thbs1P35441 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Thbs1P35441 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Thbs1P35441 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC12.02□□□□□ -0.48
Thbs1P35441 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC12.02□□□□□ -0.48
Thbs1P35441 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thbs1P35441 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.02□□□□□ -0.48
Thbs1P35441 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC12.02□□□□□ -0.48
Thbs1P35441 AC241621.2-201ENSMUST00000223991 2151 ntBASIC12.02□□□□□ -0.48
Thbs1P35441 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC12.02□□□□□ -0.48
Thbs1P35441 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Thbs1P35441 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thbs1P35441 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Thbs1P35441 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs1P35441 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs1P35441 Umad1-206ENSMUST00000160705 624 ntAPPRIS P4 TSL 2 BASIC12.02□□□□□ -0.49
Thbs1P35441 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.02□□□□□ -0.49
Thbs1P35441 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Thbs1P35441 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Thbs1P35441 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.02□□□□□ -0.49
Thbs1P35441 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.02□□□□□ -0.49
Thbs1P35441 Ighv8-10-201ENSMUST00000199579 358 ntBASIC12.02□□□□□ -0.49
Thbs1P35441 Gm6458-201ENSMUST00000211573 635 ntBASIC12.02□□□□□ -0.49
Thbs1P35441 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC12.02□□□□□ -0.49
Thbs1P35441 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms