Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sftpa1P35242 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Sftpa1P35242 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.96□□□□□ -0.49
Sftpa1P35242 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Sftpa1P35242 Gm3287-205ENSMUST00000228893 1332 ntBASIC11.96□□□□□ -0.49
Sftpa1P35242 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sftpa1P35242 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sftpa1P35242 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sftpa1P35242 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sftpa1P35242 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Sftpa1P35242 1810063I02Rik-201ENSMUST00000130205 274 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sftpa1P35242 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC11.96□□□□□ -0.49
Sftpa1P35242 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Sftpa1P35242 Gm44136-201ENSMUST00000203819 1106 ntBASIC11.96□□□□□ -0.49
Sftpa1P35242 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC11.96□□□□□ -0.49
Sftpa1P35242 Gm18556-201ENSMUST00000219748 1031 ntBASIC11.96□□□□□ -0.49
Sftpa1P35242 2410015M20Rik-201ENSMUST00000052832 755 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sftpa1P35242 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sftpa1P35242 Tnnt3-201ENSMUST00000074187 1007 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sftpa1P35242 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Sftpa1P35242 AC126444.1-201ENSMUST00000225938 1768 ntBASIC11.96□□□□□ -0.49
Sftpa1P35242 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Sftpa1P35242 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sftpa1P35242 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sftpa1P35242 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sftpa1P35242 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sftpa1P35242 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sftpa1P35242 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC11.96□□□□□ -0.5
Sftpa1P35242 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Sftpa1P35242 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Sftpa1P35242 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sftpa1P35242 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sftpa1P35242 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sftpa1P35242 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sftpa1P35242 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Sftpa1P35242 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Sftpa1P35242 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 Gm4864-201ENSMUST00000219894 1461 ntBASIC11.95□□□□□ -0.5
Sftpa1P35242 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC11.95□□□□□ -0.5
Sftpa1P35242 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 Gm7789-202ENSMUST00000211273 1400 ntBASIC11.95□□□□□ -0.5
Sftpa1P35242 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Sftpa1P35242 Gm26513-201ENSMUST00000181802 2489 ntBASIC11.95□□□□□ -0.5
Sftpa1P35242 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.95□□□□□ -0.5
Sftpa1P35242 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sftpa1P35242 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Sftpa1P35242 Gm16481-201ENSMUST00000119074 1227 ntBASIC11.95□□□□□ -0.5
Sftpa1P35242 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC11.95□□□□□ -0.5
Sftpa1P35242 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC11.95□□□□□ -0.5
Sftpa1P35242 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC11.95□□□□□ -0.5
Sftpa1P35242 Gm38092-201ENSMUST00000195600 653 ntBASIC11.95□□□□□ -0.5
Sftpa1P35242 4930404N11Rik-201ENSMUST00000020456 691 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC11.95□□□□□ -0.5
Sftpa1P35242 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC11.95□□□□□ -0.5
Sftpa1P35242 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 AC167013.2-201ENSMUST00000228520 2684 ntBASIC11.95□□□□□ -0.5
Sftpa1P35242 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Sftpa1P35242 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Sftpa1P35242 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 Gm11696-203ENSMUST00000188296 1793 ntTSL 3 BASIC11.95□□□□□ -0.5
Sftpa1P35242 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Sftpa1P35242 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.94□□□□□ -0.5
Sftpa1P35242 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm13996-201ENSMUST00000118456 430 ntBASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm12616-201ENSMUST00000118594 382 ntBASIC11.94□□□□□ -0.5
Sftpa1P35242 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm12624-201ENSMUST00000177615 382 ntBASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm12621-201ENSMUST00000177760 382 ntBASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm12615-201ENSMUST00000177970 382 ntBASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm12622-201ENSMUST00000177975 382 ntBASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm12627-201ENSMUST00000178412 382 ntBASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm12625-201ENSMUST00000179122 382 ntBASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm12614-201ENSMUST00000179586 382 ntBASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm12613-201ENSMUST00000180323 382 ntBASIC11.94□□□□□ -0.5
Sftpa1P35242 1700030M09Rik-202ENSMUST00000181679 964 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm7003-201ENSMUST00000195089 312 ntBASIC11.94□□□□□ -0.5
Sftpa1P35242 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms