Protein–RNA interactions for Protein: P33435

Mmp13, Collagenase 3, mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp13P33435 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Irak1-203ENSMUST00000101458 2052 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Mmp13P33435 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Mmp13P33435 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC13.29□□□□□ -0.28
Mmp13P33435 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC13.29□□□□□ -0.28
Mmp13P33435 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC13.29□□□□□ -0.28
Mmp13P33435 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.29□□□□□ -0.28
Mmp13P33435 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.29□□□□□ -0.28
Mmp13P33435 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Mmp13P33435 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC13.29□□□□□ -0.28
Mmp13P33435 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Myo1d-202ENSMUST00000070997 3106 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Gm42748-201ENSMUST00000199354 2341 ntBASIC13.29□□□□□ -0.28
Mmp13P33435 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Mmp13P33435 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Mmp13P33435 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Mmp13P33435 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Mmp13P33435 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Gm9025-201ENSMUST00000122415 1575 ntBASIC13.28□□□□□ -0.28
Mmp13P33435 AC113060.1-201ENSMUST00000225689 1573 ntBASIC13.28□□□□□ -0.28
Mmp13P33435 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC13.28□□□□□ -0.28
Mmp13P33435 Lmntd1-201ENSMUST00000111706 2350 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Gm15821-201ENSMUST00000121995 1210 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Gm29608-201ENSMUST00000190444 463 ntBASIC13.28□□□□□ -0.28
Mmp13P33435 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC13.28□□□□□ -0.28
Mmp13P33435 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 AC150560.1-201ENSMUST00000227731 1187 ntBASIC13.28□□□□□ -0.28
Mmp13P33435 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.28□□□□□ -0.28
Mmp13P33435 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Zkscan3-207ENSMUST00000223831 2101 ntBASIC13.28□□□□□ -0.28
Mmp13P33435 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Slc7a6-201ENSMUST00000034378 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.28□□□□□ -0.28
Mmp13P33435 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Mmp13P33435 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Mmp13P33435 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Mmp13P33435 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Mmp13P33435 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
Mmp13P33435 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Mmp13P33435 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
Mmp13P33435 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Mmp13P33435 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Mmp13P33435 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Mmp13P33435 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Mmp13P33435 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Mmp13P33435 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Mmp13P33435 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Mmp13P33435 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Mmp13P33435 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Mmp13P33435 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC13.27□□□□□ -0.28
Mmp13P33435 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Mmp13P33435 Chpf2-202ENSMUST00000121863 3715 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Mmp13P33435 Gm15371-201ENSMUST00000117057 784 ntBASIC13.27□□□□□ -0.29
Mmp13P33435 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp13P33435 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.27□□□□□ -0.29
Mmp13P33435 Gm38144-201ENSMUST00000192790 465 ntBASIC13.27□□□□□ -0.29
Mmp13P33435 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp13P33435 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp13P33435 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp13P33435 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp13P33435 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp13P33435 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Mmp13P33435 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp13P33435 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp13P33435 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC13.27□□□□□ -0.29
Mmp13P33435 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp13P33435 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp13P33435 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Mmp13P33435 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp13P33435 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp13P33435 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp13P33435 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Mmp13P33435 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms