Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC11.17□□□□□ -0.62
Slc6a1P31648 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.17□□□□□ -0.62
Slc6a1P31648 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Rbms2-201ENSMUST00000092033 1481 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Gtf2i-203ENSMUST00000111261 4381 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Slc6a1P31648 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Galc-201ENSMUST00000021390 3832 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Qrich1-201ENSMUST00000006851 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Zfp341-201ENSMUST00000081926 3299 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Slc6a1P31648 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Slc6a1P31648 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Gm18983-201ENSMUST00000222884 2729 ntBASIC11.16□□□□□ -0.62
Slc6a1P31648 Galnt11-202ENSMUST00000114950 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Slc6a1P31648 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Nckap5l-201ENSMUST00000023747 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC11.16□□□□□ -0.62
Slc6a1P31648 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Aknad1-202ENSMUST00000133931 2603 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Slc6a1P31648 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Lipe-201ENSMUST00000003207 3613 ntAPPRIS P4 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Slc6a1P31648 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC11.16□□□□□ -0.62
Slc6a1P31648 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Gm27618-201ENSMUST00000183671 60 ntBASIC11.16□□□□□ -0.62
Slc6a1P31648 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.16□□□□□ -0.62
Slc6a1P31648 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC11.16□□□□□ -0.62
Slc6a1P31648 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.16□□□□□ -0.62
Slc6a1P31648 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Gm29050-201ENSMUST00000190732 2528 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.16□□□□□ -0.62
Slc6a1P31648 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Gm44942-201ENSMUST00000096093 2072 ntBASIC11.16□□□□□ -0.62
Slc6a1P31648 Ppp2r2b-202ENSMUST00000117687 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.16□□□□□ -0.62
Slc6a1P31648 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC11.16□□□□□ -0.62
Slc6a1P31648 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Nup160-201ENSMUST00000057481 5684 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.16□□□□□ -0.62
Slc6a1P31648 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.16□□□□□ -0.62
Slc6a1P31648 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Slc6a1P31648 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Slc6a1P31648 Tcf4-234ENSMUST00000201410 1915 ntTSL 5 BASIC11.15□□□□□ -0.62
Slc6a1P31648 Tcf4-243ENSMUST00000202057 1941 ntTSL 5 BASIC11.15□□□□□ -0.62
Slc6a1P31648 Gm6210-201ENSMUST00000204734 1942 ntBASIC11.15□□□□□ -0.62
Slc6a1P31648 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Slc6a1P31648 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.15□□□□□ -0.62
Slc6a1P31648 Aldh1a7-201ENSMUST00000025656 2066 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Gm37849-201ENSMUST00000194722 1881 ntBASIC11.15□□□□□ -0.62
Slc6a1P31648 Brf2-201ENSMUST00000033877 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Slc6a1P31648 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Gm15594-201ENSMUST00000137958 2215 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC11.15□□□□□ -0.62
Slc6a1P31648 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Slc6a1P31648 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms