Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Cacng5-201ENSMUST00000039071 3705 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nedd8P29595 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nedd8P29595 Gtf2e1-201ENSMUST00000023525 3084 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Plagl1-203ENSMUST00000121766 3897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 AC122840.1-201ENSMUST00000220915 3334 ntBASIC11.95□□□□□ -0.5
Nedd8P29595 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Sypl2-201ENSMUST00000141387 4090 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 P2rx1-201ENSMUST00000021141 2486 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.95□□□□□ -0.5
Nedd8P29595 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nedd8P29595 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC11.95□□□□□ -0.5
Nedd8P29595 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC11.95□□□□□ -0.5
Nedd8P29595 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nedd8P29595 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.95□□□□□ -0.5
Nedd8P29595 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Arhgef2-206ENSMUST00000175779 3065 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nedd8P29595 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Apbb2-216ENSMUST00000162366 6540 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.95□□□□□ -0.5
Nedd8P29595 Pou2f1-209ENSMUST00000160908 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Grin1-206ENSMUST00000114314 3882 ntTSL 5 BASIC11.95□□□□□ -0.5
Nedd8P29595 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Plekhg2-201ENSMUST00000094644 4623 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nedd8P29595 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.95□□□□□ -0.5
Nedd8P29595 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.94□□□□□ -0.5
Nedd8P29595 Gm37014-201ENSMUST00000194723 2253 ntBASIC11.94□□□□□ -0.5
Nedd8P29595 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Gipr-201ENSMUST00000094790 2856 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
Nedd8P29595 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
Nedd8P29595 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Zbtb6-202ENSMUST00000112932 5077 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
Nedd8P29595 Zeb2-212ENSMUST00000176438 9124 ntAPPRIS P2 TSL 5 BASIC11.94□□□□□ -0.5
Nedd8P29595 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC11.94□□□□□ -0.5
Nedd8P29595 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.94□□□□□ -0.5
Nedd8P29595 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC11.94□□□□□ -0.5
Nedd8P29595 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Gm18737-201ENSMUST00000173594 937 ntBASIC11.94□□□□□ -0.5
Nedd8P29595 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC11.94□□□□□ -0.5
Nedd8P29595 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.94□□□□□ -0.5
Nedd8P29595 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Mthfd1l-201ENSMUST00000043735 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Fyttd1-201ENSMUST00000023489 4312 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Klhl14-201ENSMUST00000049105 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 AI314180-202ENSMUST00000102889 7045 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Pip4k2b-201ENSMUST00000018691 5053 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Adamts16-202ENSMUST00000109694 3378 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Gng7-203ENSMUST00000117805 3382 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.94□□□□□ -0.5
Nedd8P29595 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
Nedd8P29595 Oraov1-204ENSMUST00000128057 2231 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Qpctl-201ENSMUST00000032566 2710 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Cnot7-211ENSMUST00000149992 2982 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Nedd8P29595 Syvn1-207ENSMUST00000156550 3363 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Nedd8P29595 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nedd8P29595 Rasgef1b-203ENSMUST00000146396 3339 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 AF529169-201ENSMUST00000044491 7202 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Chtop-201ENSMUST00000001043 3257 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.93□□□□□ -0.5
Nedd8P29595 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 AC154262.2-202ENSMUST00000225158 1331 ntBASIC11.93□□□□□ -0.5
Nedd8P29595 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC11.93□□□□□ -0.5
Nedd8P29595 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nedd8P29595 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Nedd8P29595 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Slc25a36-202ENSMUST00000085206 5227 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Nedd8P29595 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC11.93□□□□□ -0.5
Nedd8P29595 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC11.93□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms