Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Vcam1P29533 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Gm14017-201ENSMUST00000121934 386 ntBASIC14.85□□□□□ -0.03
Vcam1P29533 Gm24990-201ENSMUST00000157406 323 ntBASIC14.85□□□□□ -0.03
Vcam1P29533 Gm24845-201ENSMUST00000158034 109 ntBASIC14.85□□□□□ -0.03
Vcam1P29533 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Pjvk-201ENSMUST00000099986 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Vcam1P29533 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC14.85□□□□□ -0.03
Vcam1P29533 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 AC137842.1-201ENSMUST00000227896 2064 ntBASIC14.85□□□□□ -0.03
Vcam1P29533 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Gm9920-204ENSMUST00000148544 2752 ntTSL 2 BASIC14.85□□□□□ -0.03
Vcam1P29533 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Vcam1P29533 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.84□□□□□ -0.03
Vcam1P29533 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC14.84□□□□□ -0.03
Vcam1P29533 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 H2-T22-203ENSMUST00000080015 1761 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Rhox2c-201ENSMUST00000115190 762 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Vcam1P29533 Gm13665-201ENSMUST00000120830 528 ntBASIC14.84□□□□□ -0.03
Vcam1P29533 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC14.84□□□□□ -0.03
Vcam1P29533 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.84□□□□□ -0.03
Vcam1P29533 Gm2260-201ENSMUST00000184965 657 ntBASIC14.84□□□□□ -0.03
Vcam1P29533 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Gm28172-201ENSMUST00000189880 506 ntTSL 3 BASIC14.84□□□□□ -0.03
Vcam1P29533 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Gm39404-201ENSMUST00000216350 313 ntBASIC14.84□□□□□ -0.03
Vcam1P29533 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.84□□□□□ -0.03
Vcam1P29533 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Vcam1P29533 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC14.84□□□□□ -0.03
Vcam1P29533 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.84□□□□□ -0.03
Vcam1P29533 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Vcam1P29533 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Vcam1P29533 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vcam1P29533 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vcam1P29533 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Vcam1P29533 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vcam1P29533 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Vcam1P29533 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Vcam1P29533 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Vcam1P29533 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
Vcam1P29533 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vcam1P29533 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Vcam1P29533 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vcam1P29533 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC14.83□□□□□ -0.04
Vcam1P29533 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vcam1P29533 Gm13315-201ENSMUST00000120376 991 ntBASIC14.83□□□□□ -0.04
Vcam1P29533 Gm17028-201ENSMUST00000170026 704 ntTSL 3 BASIC14.83□□□□□ -0.04
Vcam1P29533 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC14.83□□□□□ -0.04
Vcam1P29533 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.83□□□□□ -0.04
Vcam1P29533 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vcam1P29533 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.83□□□□□ -0.04
Vcam1P29533 1810032O08Rik-201ENSMUST00000106378 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vcam1P29533 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vcam1P29533 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Vcam1P29533 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Vcam1P29533 Gm15326-202ENSMUST00000128198 1422 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vcam1P29533 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Vcam1P29533 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcam1P29533 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcam1P29533 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcam1P29533 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Vcam1P29533 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Vcam1P29533 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC14.82□□□□□ -0.04
Vcam1P29533 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcam1P29533 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Vcam1P29533 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC14.82□□□□□ -0.04
Vcam1P29533 Lcn6-203ENSMUST00000114199 729 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 69.1 ms