Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Gm15240-201ENSMUST00000118156 720 ntBASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Gm15957-201ENSMUST00000118893 974 ntBASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Gm24644-201ENSMUST00000157114 139 ntBASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Hspb9-201ENSMUST00000017976 652 ntAPPRIS ALT2 BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Mir8109-201ENSMUST00000184375 117 ntBASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Gm43818-201ENSMUST00000200605 466 ntBASIC10.77□□□□□ -0.69
Tnfrsf9P20334 2700097O09Rik-201ENSMUST00000021406 1105 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Gm5425-201ENSMUST00000214125 459 ntBASIC10.77□□□□□ -0.69
Tnfrsf9P20334 1700016D06Rik-201ENSMUST00000033906 1263 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Gm17383-201ENSMUST00000078739 1041 ntBASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Gpr31b-201ENSMUST00000091648 960 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Gm27196-201ENSMUST00000184787 2582 ntBASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Pcdhgb1-201ENSMUST00000192931 4723 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Pcdhga9-201ENSMUST00000091935 4724 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Ntrk2-204ENSMUST00000224259 3049 ntBASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 4931409K22Rik-201ENSMUST00000088302 2613 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
Tnfrsf9P20334 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 4833422C13Rik-202ENSMUST00000160385 2828 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Tmem132a-201ENSMUST00000025645 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Gm13350-201ENSMUST00000120519 479 ntBASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Gm2639-201ENSMUST00000156881 1297 ntBASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Gm8801-201ENSMUST00000173255 1064 ntBASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Gm27514-201ENSMUST00000183692 110 ntBASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Gm37073-201ENSMUST00000192469 1222 ntBASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Gm5069-202ENSMUST00000192714 1011 ntBASIC10.76□□□□□ -0.69
Tnfrsf9P20334 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Gm45079-201ENSMUST00000205627 461 ntTSL 3 BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Gm44840-201ENSMUST00000208983 1168 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 AC173345.3-201ENSMUST00000221245 1093 ntBASIC10.76□□□□□ -0.69
Tnfrsf9P20334 CT485787.1-201ENSMUST00000225617 968 ntBASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Gm30238-201ENSMUST00000195528 2603 ntBASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
Tnfrsf9P20334 Apol7a-203ENSMUST00000175919 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Pcdh8-204ENSMUST00000195355 3704 ntAPPRIS ALT2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Gm6159-201ENSMUST00000191249 1724 ntBASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
Tnfrsf9P20334 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms