Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Lhcgr-201ENSMUST00000024916 2553 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC11.4□□□□□ -0.58
P04224 Ncoa6-203ENSMUST00000109670 7101 ntAPPRIS P2 TSL 5 BASIC11.4□□□□□ -0.58
P04224 Ltbp2-201ENSMUST00000002073 6769 ntAPPRIS ALT2 TSL 5 BASIC11.4□□□□□ -0.58
P04224 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
P04224 Fam53a-203ENSMUST00000065162 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.59
P04224 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.59
P04224 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
P04224 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
P04224 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Son-203ENSMUST00000117633 8731 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
P04224 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC11.39□□□□□ -0.59
P04224 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Tcea1-201ENSMUST00000081551 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Dopey2-207ENSMUST00000227156 7340 ntBASIC11.39□□□□□ -0.59
P04224 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
P04224 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC11.39□□□□□ -0.59
P04224 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
P04224 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
P04224 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC11.39□□□□□ -0.59
P04224 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC11.39□□□□□ -0.59
P04224 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.39□□□□□ -0.59
P04224 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Gm26735-201ENSMUST00000180992 2649 ntTSL 5 BASIC11.39□□□□□ -0.59
P04224 Gm29541-201ENSMUST00000191351 678 ntBASIC11.39□□□□□ -0.59
P04224 Gm38114-201ENSMUST00000191877 1232 ntBASIC11.39□□□□□ -0.59
P04224 Gm44335-201ENSMUST00000196879 141 ntBASIC11.39□□□□□ -0.59
P04224 Gm44297-201ENSMUST00000198304 141 ntBASIC11.39□□□□□ -0.59
P04224 Gm44346-201ENSMUST00000198851 141 ntBASIC11.39□□□□□ -0.59
P04224 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC11.39□□□□□ -0.59
P04224 Gm16476-201ENSMUST00000221544 139 ntBASIC11.39□□□□□ -0.59
P04224 Ftl1-ps1-202ENSMUST00000222435 938 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
P04224 Nupl1-206ENSMUST00000225111 2936 ntBASIC11.39□□□□□ -0.59
P04224 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 BC024139-201ENSMUST00000054022 2623 ntAPPRIS P2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Usp19-210ENSMUST00000193678 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Sstr5-201ENSMUST00000051864 2733 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
P04224 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Rsad1-201ENSMUST00000040487 4143 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Rfx6-204ENSMUST00000219364 2682 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Tmem200a-203ENSMUST00000218232 3510 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Rad23a-201ENSMUST00000003911 2074 ntAPPRIS P3 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
P04224 Dgkh-202ENSMUST00000226342 15261 ntAPPRIS P1 BASIC11.39□□□□□ -0.59
P04224 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC11.38□□□□□ -0.59
P04224 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
P04224 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
P04224 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Pbrm1-208ENSMUST00000112098 6566 ntTSL 5 BASIC11.38□□□□□ -0.59
P04224 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Il2rb-201ENSMUST00000089398 2692 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Olfr1428-203ENSMUST00000214103 2127 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
P04224 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
P04224 Ric3-201ENSMUST00000055993 5281 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Pcdhb14-201ENSMUST00000052387 8695 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
P04224 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.38□□□□□ -0.59
P04224 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
P04224 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Gm24543-201ENSMUST00000103867 82 ntBASIC11.38□□□□□ -0.59
P04224 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
P04224 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Gm44771-201ENSMUST00000206975 626 ntBASIC11.38□□□□□ -0.59
P04224 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
P04224 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Mki67-201ENSMUST00000033310 10061 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
P04224 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Ascc2-202ENSMUST00000109930 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC11.38□□□□□ -0.59
P04224 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
P04224 Mfap3l-203ENSMUST00000161421 4142 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms