Protein–RNA interactions for Protein: P04212

T-cell receptor beta chain V region LB2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04212 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC10.56□□□□□ -0.72
P04212 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.56□□□□□ -0.72
P04212 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Gm7730-201ENSMUST00000212486 454 ntBASIC10.56□□□□□ -0.72
P04212 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 AC192088.1-201ENSMUST00000227561 301 ntBASIC10.56□□□□□ -0.72
P04212 AC134335.2-201ENSMUST00000227660 440 ntBASIC10.56□□□□□ -0.72
P04212 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.56□□□□□ -0.72
P04212 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC10.56□□□□□ -0.72
P04212 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.56□□□□□ -0.72
P04212 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Scamp5-201ENSMUST00000046587 3225 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Lnx1-201ENSMUST00000039744 2727 ntTSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.72
P04212 Gm3365-201ENSMUST00000216296 1480 ntBASIC10.55□□□□□ -0.72
P04212 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC10.55□□□□□ -0.72
P04212 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC10.55□□□□□ -0.72
P04212 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 4930488N24Rik-201ENSMUST00000188802 1527 ntBASIC10.55□□□□□ -0.72
P04212 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Gm11400-201ENSMUST00000120853 1214 ntBASIC10.55□□□□□ -0.72
P04212 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC10.55□□□□□ -0.72
P04212 Gm42612-201ENSMUST00000197986 623 ntBASIC10.55□□□□□ -0.72
P04212 Gm43170-201ENSMUST00000199827 612 ntBASIC10.55□□□□□ -0.72
P04212 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC10.55□□□□□ -0.72
P04212 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC10.55□□□□□ -0.72
P04212 Wdyhv1-203ENSMUST00000226889 394 ntBASIC10.55□□□□□ -0.72
P04212 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC10.55□□□□□ -0.72
P04212 AC096628.2-201ENSMUST00000225443 1413 ntBASIC10.55□□□□□ -0.72
P04212 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 D230017M19Rik-201ENSMUST00000180722 3096 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Mettl13-201ENSMUST00000028017 4541 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.72
P04212 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC10.55□□□□□ -0.72
P04212 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04212 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
P04212 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
P04212 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
P04212 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
P04212 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04212 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC10.54□□□□□ -0.72
P04212 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
P04212 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC10.54□□□□□ -0.72
P04212 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC10.54□□□□□ -0.72
P04212 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
P04212 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04212 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04212 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
P04212 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04212 Ero1lb-201ENSMUST00000071973 4239 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04212 Sorcs1-201ENSMUST00000072685 4396 ntTSL 5 BASIC10.54□□□□□ -0.72
P04212 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC10.54□□□□□ -0.72
P04212 Srsf5-205ENSMUST00000110356 1568 ntAPPRIS P3 TSL 5 BASIC10.54□□□□□ -0.72
P04212 Urgcp-204ENSMUST00000120306 3972 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
P04212 Gm14057-201ENSMUST00000120631 482 ntBASIC10.54□□□□□ -0.72
P04212 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.54□□□□□ -0.72
P04212 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC10.54□□□□□ -0.72
P04212 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.54□□□□□ -0.72
P04212 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms