Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Ubr7-201ENSMUST00000046404 3261 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 AC154747.3-201ENSMUST00000224471 3470 ntBASIC11.89□□□□□ -0.51
P01852 Rubie-203ENSMUST00000227803 2430 ntBASIC11.89□□□□□ -0.51
P01852 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC11.89□□□□□ -0.51
P01852 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
P01852 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC11.88□□□□□ -0.51
P01852 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.88□□□□□ -0.51
P01852 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
P01852 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Hnrnph2-202ENSMUST00000059297 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
P01852 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.88□□□□□ -0.51
P01852 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC11.88□□□□□ -0.51
P01852 Gm37497-201ENSMUST00000195830 798 ntBASIC11.88□□□□□ -0.51
P01852 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC11.88□□□□□ -0.51
P01852 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC11.88□□□□□ -0.51
P01852 Gm9299-201ENSMUST00000206392 1140 ntBASIC11.88□□□□□ -0.51
P01852 AC135669.1-202ENSMUST00000216742 540 ntBASIC11.88□□□□□ -0.51
P01852 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC11.88□□□□□ -0.51
P01852 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Gm38049-201ENSMUST00000195698 1372 ntBASIC11.88□□□□□ -0.51
P01852 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC11.88□□□□□ -0.51
P01852 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
P01852 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
P01852 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.88□□□□□ -0.51
P01852 Gm20554-201ENSMUST00000177421 2352 ntBASIC11.87□□□□□ -0.51
P01852 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC11.87□□□□□ -0.51
P01852 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Gm5592-202ENSMUST00000206490 2623 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
P01852 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
P01852 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
P01852 Gm13226-201ENSMUST00000117838 404 ntBASIC11.87□□□□□ -0.51
P01852 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC11.87□□□□□ -0.51
P01852 Gm11425-201ENSMUST00000119608 498 ntBASIC11.87□□□□□ -0.51
P01852 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
P01852 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC11.87□□□□□ -0.51
P01852 Gm45784-201ENSMUST00000188360 142 ntBASIC11.87□□□□□ -0.51
P01852 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.87□□□□□ -0.51
P01852 Gm43818-201ENSMUST00000200605 466 ntBASIC11.87□□□□□ -0.51
P01852 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
P01852 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC11.87□□□□□ -0.51
P01852 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Gm9396-201ENSMUST00000076703 567 ntBASIC11.87□□□□□ -0.51
P01852 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.87□□□□□ -0.51
P01852 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.87□□□□□ -0.51
P01852 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
P01852 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms