Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Togaram1-207ENSMUST00000223166 6386 ntAPPRIS ALT2 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Tal1-203ENSMUST00000161601 3703 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Aldh3a2-203ENSMUST00000108715 2578 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Arhgap29-201ENSMUST00000037958 5787 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Igfbp4-201ENSMUST00000017637 3831 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC9.47□□□□□ -0.89
TcraP01849 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC9.47□□□□□ -0.89
TcraP01849 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
TcraP01849 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
TcraP01849 Arhgef28-201ENSMUST00000109426 5387 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
TcraP01849 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC9.46□□□□□ -0.89
TcraP01849 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
TcraP01849 Slc6a18-210ENSMUST00000223074 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
TcraP01849 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.89
TcraP01849 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
TcraP01849 Hk1-205ENSMUST00000130422 2916 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
TcraP01849 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
TcraP01849 Nupl1-206ENSMUST00000225111 2936 ntBASIC9.46□□□□□ -0.89
TcraP01849 Atp6v1h-201ENSMUST00000044369 2049 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
TcraP01849 Plce1-204ENSMUST00000182481 8357 ntAPPRIS P2 TSL 5 BASIC9.46□□□□□ -0.89
TcraP01849 Slc6a1-201ENSMUST00000032454 4302 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
TcraP01849 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
TcraP01849 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
TcraP01849 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
TcraP01849 AC154404.1-201ENSMUST00000223601 2077 ntBASIC9.46□□□□□ -0.89
TcraP01849 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC9.46□□□□□ -0.89
TcraP01849 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.89
TcraP01849 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC9.46□□□□□ -0.89
TcraP01849 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC9.46□□□□□ -0.89
TcraP01849 Slc22a16-201ENSMUST00000019978 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC9.46□□□□□ -0.89
TcraP01849 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.89
TcraP01849 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TcraP01849 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
TcraP01849 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
TcraP01849 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC9.46□□□□□ -0.9
TcraP01849 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC9.46□□□□□ -0.9
TcraP01849 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC9.46□□□□□ -0.9
TcraP01849 H2af-ps-201ENSMUST00000119066 295 ntBASIC9.46□□□□□ -0.9
TcraP01849 Gm13823-201ENSMUST00000119930 345 ntBASIC9.46□□□□□ -0.9
TcraP01849 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC9.46□□□□□ -0.9
TcraP01849 Gm18889-201ENSMUST00000174284 929 ntBASIC9.46□□□□□ -0.9
TcraP01849 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC9.46□□□□□ -0.9
TcraP01849 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC9.46□□□□□ -0.9
TcraP01849 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TcraP01849 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
TcraP01849 Gm43073-201ENSMUST00000198200 1189 ntBASIC9.46□□□□□ -0.9
TcraP01849 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TcraP01849 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC9.46□□□□□ -0.9
TcraP01849 AC158529.1-201ENSMUST00000223618 239 ntBASIC9.46□□□□□ -0.9
TcraP01849 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TcraP01849 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TcraP01849 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TcraP01849 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TcraP01849 Farp2-202ENSMUST00000122402 2816 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TcraP01849 Esrp1-203ENSMUST00000108311 3864 ntTSL 5 BASIC9.46□□□□□ -0.9
TcraP01849 Gm37391-201ENSMUST00000194891 2318 ntBASIC9.46□□□□□ -0.9
TcraP01849 Adra1a-206ENSMUST00000225182 2337 ntBASIC9.46□□□□□ -0.9
TcraP01849 Ildr1-203ENSMUST00000119464 2878 ntAPPRIS P3 TSL 1 (best) BASIC9.46□□□□□ -0.9
TcraP01849 Gm44292-201ENSMUST00000205194 2364 ntBASIC9.46□□□□□ -0.9
TcraP01849 Gm42466-201ENSMUST00000202099 1301 ntBASIC9.46□□□□□ -0.9
TcraP01849 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TcraP01849 Arnt2-213ENSMUST00000209133 6228 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
TcraP01849 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TcraP01849 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TcraP01849 Lzts3-201ENSMUST00000045761 4201 ntAPPRIS P3 TSL 5 BASIC9.46□□□□□ -0.9
TcraP01849 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TcraP01849 AC124751.1-201ENSMUST00000222716 1408 ntBASIC9.46□□□□□ -0.9
TcraP01849 Fbxl12-201ENSMUST00000086458 2056 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TcraP01849 Fbxl12-202ENSMUST00000086459 2086 ntAPPRIS P1 TSL 1 (best) BASIC9.46□□□□□ -0.9
TcraP01849 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
TcraP01849 Asap1-203ENSMUST00000110115 4535 ntAPPRIS ALT2 TSL 5 BASIC9.46□□□□□ -0.9
TcraP01849 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TcraP01849 Eya1-202ENSMUST00000080664 3426 ntTSL 1 (best) BASIC9.46□□□□□ -0.9
TcraP01849 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Rbm6-207ENSMUST00000183032 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Cog6-201ENSMUST00000036665 3182 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Ank2-203ENSMUST00000182008 2474 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Gm7104-201ENSMUST00000179741 2532 ntBASIC9.45□□□□□ -0.9
TcraP01849 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC9.45□□□□□ -0.9
TcraP01849 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC9.45□□□□□ -0.9
TcraP01849 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC9.45□□□□□ -0.9
TcraP01849 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Rapgef3-204ENSMUST00000128775 3586 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Mettl27-201ENSMUST00000047196 2808 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
TcraP01849 Gm5936-201ENSMUST00000114116 2857 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
TcraP01849 Gm5640-201ENSMUST00000114119 2861 ntAPPRIS P1 TSL 3 BASIC9.45□□□□□ -0.9
TcraP01849 DXBay18-201ENSMUST00000080324 2862 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 45 ms