Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Adam19-201ENSMUST00000011400 6383 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcnkO88874 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcnkO88874 Gm4875-201ENSMUST00000118257 786 ntBASIC11.59□□□□□ -0.55
CcnkO88874 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CcnkO88874 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC11.59□□□□□ -0.55
CcnkO88874 Gm27989-201ENSMUST00000184721 107 ntBASIC11.59□□□□□ -0.55
CcnkO88874 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CcnkO88874 AC238811.1-201ENSMUST00000225302 441 ntBASIC11.59□□□□□ -0.55
CcnkO88874 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcnkO88874 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
CcnkO88874 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CcnkO88874 Gm10176-201ENSMUST00000159707 2264 ntBASIC11.59□□□□□ -0.55
CcnkO88874 AC168058.1-201ENSMUST00000219521 2282 ntBASIC11.59□□□□□ -0.55
CcnkO88874 Cyp2s1-201ENSMUST00000043314 2745 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcnkO88874 Myo15b-208ENSMUST00000222123 5154 ntTSL 5 BASIC11.59□□□□□ -0.55
CcnkO88874 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcnkO88874 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC11.59□□□□□ -0.55
CcnkO88874 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcnkO88874 Pfas-201ENSMUST00000021282 6373 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
CcnkO88874 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcnkO88874 Zfand2a-202ENSMUST00000110851 3121 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcnkO88874 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcnkO88874 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcnkO88874 Gipc3-201ENSMUST00000045102 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
CcnkO88874 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
CcnkO88874 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.55
CcnkO88874 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.58□□□□□ -0.55
CcnkO88874 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
CcnkO88874 AC166574.4-201ENSMUST00000227165 1937 ntBASIC11.58□□□□□ -0.55
CcnkO88874 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
CcnkO88874 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Drd1-201ENSMUST00000021932 3526 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC11.58□□□□□ -0.56
CcnkO88874 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
CcnkO88874 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC11.58□□□□□ -0.56
CcnkO88874 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC11.58□□□□□ -0.56
CcnkO88874 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC11.58□□□□□ -0.56
CcnkO88874 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC11.58□□□□□ -0.56
CcnkO88874 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Gm18934-201ENSMUST00000216671 1044 ntBASIC11.58□□□□□ -0.56
CcnkO88874 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
CcnkO88874 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
CcnkO88874 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC11.58□□□□□ -0.56
CcnkO88874 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC11.58□□□□□ -0.56
CcnkO88874 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Cntnap1-201ENSMUST00000103109 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC11.58□□□□□ -0.56
CcnkO88874 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Crybg2-201ENSMUST00000121391 4761 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
CcnkO88874 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Slx4-201ENSMUST00000040790 5706 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
CcnkO88874 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Tgfbr2-201ENSMUST00000035014 3476 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC11.57□□□□□ -0.56
CcnkO88874 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC11.57□□□□□ -0.56
CcnkO88874 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
CcnkO88874 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.57□□□□□ -0.56
CcnkO88874 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC11.57□□□□□ -0.56
CcnkO88874 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Mir7684-201ENSMUST00000183858 60 ntBASIC11.57□□□□□ -0.56
CcnkO88874 Gm18905-201ENSMUST00000205454 928 ntBASIC11.57□□□□□ -0.56
CcnkO88874 Gm20949-201ENSMUST00000206478 952 ntBASIC11.57□□□□□ -0.56
CcnkO88874 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.57□□□□□ -0.56
CcnkO88874 AC131997.1-201ENSMUST00000228611 1229 ntBASIC11.57□□□□□ -0.56
CcnkO88874 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
CcnkO88874 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms