Protein–RNA interactions for Protein: O70591

Pfdn2, Prefoldin subunit 2, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn2O70591 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC10.89□□□□□ -0.67
Pfdn2O70591 Slc29a1-204ENSMUST00000163492 2216 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Gm42463-201ENSMUST00000198041 4886 ntBASIC10.89□□□□□ -0.67
Pfdn2O70591 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Cacna1s-201ENSMUST00000112064 6251 ntAPPRIS P3 TSL 2 BASIC10.89□□□□□ -0.67
Pfdn2O70591 Gm12020-201ENSMUST00000119030 2042 ntBASIC10.89□□□□□ -0.67
Pfdn2O70591 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Spred2-201ENSMUST00000093298 2852 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Nlrp6-203ENSMUST00000183845 4436 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Pfdn2O70591 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Il21r-201ENSMUST00000033000 2499 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
Pfdn2O70591 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC10.89□□□□□ -0.67
Pfdn2O70591 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Gm18889-201ENSMUST00000174284 929 ntBASIC10.89□□□□□ -0.67
Pfdn2O70591 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC10.89□□□□□ -0.67
Pfdn2O70591 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC10.89□□□□□ -0.67
Pfdn2O70591 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Gm15500-202ENSMUST00000071641 1019 ntBASIC10.89□□□□□ -0.67
Pfdn2O70591 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Mir125a-201ENSMUST00000083545 68 ntBASIC10.89□□□□□ -0.67
Pfdn2O70591 Tsga10-202ENSMUST00000088072 3837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC10.89□□□□□ -0.67
Pfdn2O70591 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Sspn-201ENSMUST00000032383 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Cul5-201ENSMUST00000034529 3585 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pfdn2O70591 Ablim1-211ENSMUST00000111555 2562 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Pfdn2O70591 Hcrtr2-203ENSMUST00000184757 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Pla2g6-206ENSMUST00000173163 3018 ntTSL 5 BASIC10.89□□□□□ -0.67
Pfdn2O70591 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Rgs12-201ENSMUST00000030984 5472 ntAPPRIS P3 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 AC211878.3-201ENSMUST00000222629 2018 ntBASIC10.89□□□□□ -0.67
Pfdn2O70591 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Pfdn2O70591 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Pfdn2O70591 Igsf3-201ENSMUST00000043983 7371 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Dopey2-207ENSMUST00000227156 7340 ntBASIC10.88□□□□□ -0.67
Pfdn2O70591 Gm45242-201ENSMUST00000210666 2129 ntBASIC10.88□□□□□ -0.67
Pfdn2O70591 Igfbp5-201ENSMUST00000027377 6006 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Lingo4-201ENSMUST00000050975 3645 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Shtn1-201ENSMUST00000047511 4081 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Gm43423-201ENSMUST00000198390 2094 ntBASIC10.88□□□□□ -0.67
Pfdn2O70591 Cdadc1-203ENSMUST00000167100 2243 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Pfdn2O70591 Dclk2-202ENSMUST00000191752 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Rin3-201ENSMUST00000056950 3892 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Gm42372-201ENSMUST00000206129 5067 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Pfdn2O70591 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC10.88□□□□□ -0.67
Pfdn2O70591 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC10.88□□□□□ -0.67
Pfdn2O70591 C330027C09Rik-202ENSMUST00000117994 3977 ntTSL 5 BASIC10.88□□□□□ -0.67
Pfdn2O70591 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC10.88□□□□□ -0.67
Pfdn2O70591 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Gm43452-201ENSMUST00000201873 991 ntBASIC10.88□□□□□ -0.67
Pfdn2O70591 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC10.88□□□□□ -0.67
Pfdn2O70591 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC10.88□□□□□ -0.67
Pfdn2O70591 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
Pfdn2O70591 Parp14-201ENSMUST00000042665 7417 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Mfsd4b5-202ENSMUST00000073618 2978 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.88□□□□□ -0.67
Pfdn2O70591 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Fndc3b-201ENSMUST00000046157 6875 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
Pfdn2O70591 Ncor2-202ENSMUST00000086083 8575 ntAPPRIS P2 TSL 5 BASIC10.88□□□□□ -0.67
Pfdn2O70591 Ralgps2-211ENSMUST00000190648 2498 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn2O70591 Gm42571-201ENSMUST00000201197 2464 ntBASIC10.87□□□□□ -0.67
Pfdn2O70591 Gm13730-201ENSMUST00000121036 1462 ntBASIC10.87□□□□□ -0.67
Pfdn2O70591 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC10.87□□□□□ -0.67
Pfdn2O70591 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC10.87□□□□□ -0.67
Pfdn2O70591 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
Pfdn2O70591 Magel2-201ENSMUST00000080403 4631 ntAPPRIS P1 BASIC10.87□□□□□ -0.67
Pfdn2O70591 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC10.87□□□□□ -0.67
Pfdn2O70591 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC10.87□□□□□ -0.67
Pfdn2O70591 AC114543.1-201ENSMUST00000226451 1558 ntBASIC10.87□□□□□ -0.67
Pfdn2O70591 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms