Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pdlim1O70400 Gm14921-201ENSMUST00000118643 908 ntBASIC12.84□□□□□ -0.35
Pdlim1O70400 Gm14660-201ENSMUST00000119809 575 ntBASIC12.84□□□□□ -0.35
Pdlim1O70400 4930579D09Rik-201ENSMUST00000132321 469 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Pdlim1O70400 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.84□□□□□ -0.35
Pdlim1O70400 Gm17208-201ENSMUST00000168388 535 ntBASIC12.84□□□□□ -0.35
Pdlim1O70400 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC12.84□□□□□ -0.35
Pdlim1O70400 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.84□□□□□ -0.35
Pdlim1O70400 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.84□□□□□ -0.35
Pdlim1O70400 Gm8099-201ENSMUST00000200510 742 ntBASIC12.84□□□□□ -0.35
Pdlim1O70400 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.84□□□□□ -0.35
Pdlim1O70400 Tyms-ps-201ENSMUST00000219550 915 ntBASIC12.84□□□□□ -0.35
Pdlim1O70400 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC12.84□□□□□ -0.35
Pdlim1O70400 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Ube2a-201ENSMUST00000016452 1732 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC12.84□□□□□ -0.35
Pdlim1O70400 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Pdlim1O70400 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pdlim1O70400 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.83□□□□□ -0.35
Pdlim1O70400 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pdlim1O70400 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.83□□□□□ -0.35
Pdlim1O70400 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Pdlim1O70400 Dysf-214ENSMUST00000204354 6432 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pdlim1O70400 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC12.83□□□□□ -0.36
Pdlim1O70400 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC12.83□□□□□ -0.36
Pdlim1O70400 Mir1982-201ENSMUST00000157368 74 ntBASIC12.83□□□□□ -0.36
Pdlim1O70400 Gm22121-201ENSMUST00000175148 54 ntBASIC12.83□□□□□ -0.36
Pdlim1O70400 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Pdlim1O70400 Gm18062-201ENSMUST00000208020 547 ntBASIC12.83□□□□□ -0.36
Pdlim1O70400 Gm18055-201ENSMUST00000208254 547 ntBASIC12.83□□□□□ -0.36
Pdlim1O70400 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC12.83□□□□□ -0.36
Pdlim1O70400 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.83□□□□□ -0.36
Pdlim1O70400 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
Pdlim1O70400 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pdlim1O70400 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Pdlim1O70400 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC12.83□□□□□ -0.36
Pdlim1O70400 Gm5620-201ENSMUST00000077991 1348 ntBASIC12.83□□□□□ -0.36
Pdlim1O70400 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
Pdlim1O70400 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Pdlim1O70400 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
Pdlim1O70400 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Ehbp1l1-201ENSMUST00000049295 6404 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Plekha5-212ENSMUST00000204876 1928 ntTSL 5 BASIC12.82□□□□□ -0.36
Pdlim1O70400 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC12.82□□□□□ -0.36
Pdlim1O70400 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Leng8-203ENSMUST00000121270 3620 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Pdlim1O70400 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC12.82□□□□□ -0.36
Pdlim1O70400 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.82□□□□□ -0.36
Pdlim1O70400 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Pdlim1O70400 BC023719-201ENSMUST00000174728 978 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 48.9 ms