Protein–RNA interactions for Protein: O35900

Lsm2, U6 snRNA-associated Sm-like protein LSm2, mousemouse

Known RBP Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm2O35900 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC11.54□□□□□ -0.56
Lsm2O35900 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Gm7063-201ENSMUST00000186840 981 ntBASIC11.54□□□□□ -0.56
Lsm2O35900 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Gm17795-201ENSMUST00000214505 757 ntBASIC11.54□□□□□ -0.56
Lsm2O35900 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Rbfox2-208ENSMUST00000227930 1218 ntBASIC11.54□□□□□ -0.56
Lsm2O35900 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
Lsm2O35900 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC11.54□□□□□ -0.56
Lsm2O35900 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Lsm2O35900 Sec61g-203ENSMUST00000109643 1862 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Lsm2O35900 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
Lsm2O35900 Vax2os-203ENSMUST00000155159 4063 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Lsm2O35900 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Ptbp1-216ENSMUST00000172282 3110 ntAPPRIS P4 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Sun2-201ENSMUST00000046259 3804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Tspan32-202ENSMUST00000075172 1876 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.53□□□□□ -0.56
Lsm2O35900 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Npc1-201ENSMUST00000025279 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Ccdc170-201ENSMUST00000019901 2151 ntAPPRIS P2 TSL 5 BASIC11.53□□□□□ -0.56
Lsm2O35900 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC11.53□□□□□ -0.56
Lsm2O35900 Gm7336-201ENSMUST00000107041 1232 ntBASIC11.53□□□□□ -0.56
Lsm2O35900 Gm5638-201ENSMUST00000118618 1258 ntBASIC11.53□□□□□ -0.56
Lsm2O35900 Gm12485-201ENSMUST00000119641 291 ntBASIC11.53□□□□□ -0.56
Lsm2O35900 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC11.53□□□□□ -0.56
Lsm2O35900 Gm11978-201ENSMUST00000122315 466 ntBASIC11.53□□□□□ -0.56
Lsm2O35900 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Gm27680-201ENSMUST00000184192 160 ntBASIC11.53□□□□□ -0.56
Lsm2O35900 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC11.53□□□□□ -0.56
Lsm2O35900 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Slc35f6-205ENSMUST00000196740 1972 ntTSL 5 BASIC11.53□□□□□ -0.56
Lsm2O35900 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Lsm2O35900 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC11.53□□□□□ -0.56
Lsm2O35900 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC11.53□□□□□ -0.56
Lsm2O35900 Camsap3-203ENSMUST00000207077 3832 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Lsm2O35900 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Lsm2O35900 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm2O35900 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm2O35900 Eif4enif1-204ENSMUST00000120721 2952 ntTSL 5 BASIC11.52□□□□□ -0.56
Lsm2O35900 Gm28373-201ENSMUST00000178129 2724 ntTSL 2 BASIC11.52□□□□□ -0.56
Lsm2O35900 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm2O35900 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Lsm2O35900 Prkcsh-202ENSMUST00000115331 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm2O35900 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm2O35900 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.52□□□□□ -0.56
Lsm2O35900 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm2O35900 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm2O35900 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.52□□□□□ -0.56
Lsm2O35900 Ppp2r1b-202ENSMUST00000114437 3430 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm2O35900 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.52□□□□□ -0.57
Lsm2O35900 Nrg1-206ENSMUST00000208205 2645 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Lsm2O35900 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm2O35900 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm2O35900 Tmppe-201ENSMUST00000111820 2921 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm2O35900 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm2O35900 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm2O35900 Gm9630-201ENSMUST00000178304 885 ntBASIC11.52□□□□□ -0.57
Lsm2O35900 Gm19184-201ENSMUST00000196798 928 ntBASIC11.52□□□□□ -0.57
Lsm2O35900 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC11.52□□□□□ -0.57
Lsm2O35900 Gm7774-201ENSMUST00000200064 533 ntBASIC11.52□□□□□ -0.57
Lsm2O35900 AC073947.2-201ENSMUST00000215888 1130 ntBASIC11.52□□□□□ -0.57
Lsm2O35900 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm2O35900 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm2O35900 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm2O35900 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm2O35900 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm2O35900 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm2O35900 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm2O35900 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm2O35900 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm2O35900 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.57
Lsm2O35900 C130026I21Rik-202ENSMUST00000093506 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Lsm2O35900 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms