Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Gm22191-201ENSMUST00000103831 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm24721-201ENSMUST00000103849 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm28018-201ENSMUST00000103869 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm26399-201ENSMUST00000103937 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC11.79□□□□□ -0.52
Matn3O35701 Gm25349-201ENSMUST00000177728 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm23616-201ENSMUST00000177797 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm25871-201ENSMUST00000177816 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm24752-201ENSMUST00000178240 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm24496-201ENSMUST00000178287 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm25649-201ENSMUST00000178476 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm25548-201ENSMUST00000178681 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm23147-201ENSMUST00000178841 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm26095-201ENSMUST00000179270 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm22171-201ENSMUST00000179283 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm23936-201ENSMUST00000179354 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm22619-201ENSMUST00000179516 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm25255-201ENSMUST00000179579 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm24755-201ENSMUST00000179691 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm26506-201ENSMUST00000179692 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm25086-201ENSMUST00000179931 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm23243-201ENSMUST00000180047 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm24659-201ENSMUST00000180212 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm24169-201ENSMUST00000180244 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm23689-201ENSMUST00000180354 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm27359-201ENSMUST00000184153 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm27785-201ENSMUST00000184268 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm27466-201ENSMUST00000184396 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm27703-201ENSMUST00000184836 110 ntBASIC11.79□□□□□ -0.52
Matn3O35701 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.79□□□□□ -0.52
Matn3O35701 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.79□□□□□ -0.52
Matn3O35701 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC11.79□□□□□ -0.52
Matn3O35701 AC147241.1-201ENSMUST00000222173 785 ntTSL 3 BASIC11.79□□□□□ -0.52
Matn3O35701 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Matn3O35701 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Matn3O35701 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Axl-202ENSMUST00000085948 3899 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Catsper4-201ENSMUST00000055892 1725 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Gm43727-201ENSMUST00000198021 2647 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Gm43174-201ENSMUST00000195914 2445 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Esco2-201ENSMUST00000022613 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Dolpp1-203ENSMUST00000123202 2294 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Dolpp1-201ENSMUST00000028209 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Matn3O35701 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Matn3O35701 Gm7224-201ENSMUST00000121359 2066 ntBASIC11.79□□□□□ -0.52
Matn3O35701 Rtbdn-204ENSMUST00000152378 2322 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Gm43721-201ENSMUST00000199677 2313 ntBASIC11.78□□□□□ -0.52
Matn3O35701 Gm44086-201ENSMUST00000203251 2349 ntBASIC11.78□□□□□ -0.52
Matn3O35701 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Grm5-201ENSMUST00000107263 3516 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC11.78□□□□□ -0.52
Matn3O35701 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC11.78□□□□□ -0.52
Matn3O35701 Traf3ip2-201ENSMUST00000019987 2867 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Fam161a-203ENSMUST00000109557 1947 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Matn3O35701 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Matn3O35701 Gjb2-201ENSMUST00000055698 2406 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Ptp4a1-201ENSMUST00000027232 4145 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Ffar1-201ENSMUST00000052700 4175 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Matn3O35701 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Gm25287-201ENSMUST00000103846 110 ntBASIC11.78□□□□□ -0.52
Matn3O35701 Gm22918-201ENSMUST00000103855 110 ntBASIC11.78□□□□□ -0.52
Matn3O35701 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Matn3O35701 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Matn3O35701 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC11.78□□□□□ -0.52
Matn3O35701 Gm27430-201ENSMUST00000184585 107 ntBASIC11.78□□□□□ -0.52
Matn3O35701 Gm10253-201ENSMUST00000194270 940 ntBASIC11.78□□□□□ -0.52
Matn3O35701 Gm44333-201ENSMUST00000197168 107 ntBASIC11.78□□□□□ -0.52
Matn3O35701 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.78□□□□□ -0.52
Matn3O35701 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC11.78□□□□□ -0.52
Matn3O35701 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 4930432B10Rik-201ENSMUST00000181688 2085 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Pex11b-207ENSMUST00000165842 1562 ntTSL 2 BASIC11.78□□□□□ -0.52
Matn3O35701 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Matn3O35701 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Matn3O35701 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms