Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Nr1i3O35627 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Nr1i3O35627 Kcp-203ENSMUST00000101614 4885 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC13.93□□□□□ -0.18
Nr1i3O35627 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC13.93□□□□□ -0.18
Nr1i3O35627 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC13.93□□□□□ -0.18
Nr1i3O35627 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nr1i3O35627 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC13.93□□□□□ -0.18
Nr1i3O35627 Naa15-205ENSMUST00000193266 7480 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nr1i3O35627 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nr1i3O35627 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 S100a14-201ENSMUST00000164481 915 ntTSL 2 BASIC13.93□□□□□ -0.18
Nr1i3O35627 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC13.93□□□□□ -0.18
Nr1i3O35627 Gm8463-201ENSMUST00000208573 613 ntBASIC13.93□□□□□ -0.18
Nr1i3O35627 Gm45484-201ENSMUST00000210310 1141 ntBASIC13.93□□□□□ -0.18
Nr1i3O35627 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
Nr1i3O35627 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Nr1i3O35627 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Nr1i3O35627 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Hspa4l-201ENSMUST00000108086 2744 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Rbm39-203ENSMUST00000109587 2810 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.93□□□□□ -0.18
Nr1i3O35627 Wdr25-202ENSMUST00000167816 2657 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Nr1i3O35627 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Nr1i3O35627 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Nr1i3O35627 Adam32-202ENSMUST00000121438 2450 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Arvcf-201ENSMUST00000090103 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Phactr2-201ENSMUST00000079698 1934 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nr1i3O35627 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Nr1i3O35627 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC13.92□□□□□ -0.18
Nr1i3O35627 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Mir6977-201ENSMUST00000184960 64 ntBASIC13.92□□□□□ -0.18
Nr1i3O35627 AL593843.1-201ENSMUST00000195891 145 ntBASIC13.92□□□□□ -0.18
Nr1i3O35627 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC13.92□□□□□ -0.18
Nr1i3O35627 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
Nr1i3O35627 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Nr1i3O35627 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
Nr1i3O35627 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Nr1i3O35627 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1i3O35627 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1i3O35627 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1i3O35627 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC13.91□□□□□ -0.18
Nr1i3O35627 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1i3O35627 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC13.91□□□□□ -0.18
Nr1i3O35627 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.91□□□□□ -0.18
Nr1i3O35627 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1i3O35627 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1i3O35627 Tmem201-203ENSMUST00000105687 3697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1i3O35627 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nr1i3O35627 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1i3O35627 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Nr1i3O35627 Gm14921-201ENSMUST00000118643 908 ntBASIC13.91□□□□□ -0.18
Nr1i3O35627 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Nr1i3O35627 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.91□□□□□ -0.18
Nr1i3O35627 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC13.91□□□□□ -0.18
Nr1i3O35627 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Nr1i3O35627 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms