Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Ebf3O08791 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf3O08791 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf3O08791 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf3O08791 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf3O08791 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf3O08791 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.51□□□□□ -0.25
Ebf3O08791 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Ebf3O08791 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC13.51□□□□□ -0.25
Ebf3O08791 Fam160a2-202ENSMUST00000074686 3212 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Ebf3O08791 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Ebf3O08791 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.5□□□□□ -0.25
Ebf3O08791 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.5□□□□□ -0.25
Ebf3O08791 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ebf3O08791 Selenoh-203ENSMUST00000117299 747 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Gm15808-201ENSMUST00000119046 604 ntBASIC13.5□□□□□ -0.25
Ebf3O08791 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Ebf3O08791 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.5□□□□□ -0.25
Ebf3O08791 Gm7809-201ENSMUST00000153199 742 ntBASIC13.5□□□□□ -0.25
Ebf3O08791 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Gm2991-201ENSMUST00000173338 480 ntBASIC13.5□□□□□ -0.25
Ebf3O08791 Rab11b-ps2-201ENSMUST00000178377 657 ntBASIC13.5□□□□□ -0.25
Ebf3O08791 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC13.5□□□□□ -0.25
Ebf3O08791 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC13.5□□□□□ -0.25
Ebf3O08791 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.5□□□□□ -0.25
Ebf3O08791 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.5□□□□□ -0.25
Ebf3O08791 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Gm6169-201ENSMUST00000071118 1030 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Ebf3O08791 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Ebf3O08791 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC13.5□□□□□ -0.25
Ebf3O08791 Gm44241-201ENSMUST00000203230 1662 ntBASIC13.5□□□□□ -0.25
Ebf3O08791 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Ebf3O08791 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Ebf3O08791 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 Gm26777-201ENSMUST00000181852 2573 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.49□□□□□ -0.25
Ebf3O08791 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ebf3O08791 Zfyve28-201ENSMUST00000094868 3983 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ebf3O08791 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ebf3O08791 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ebf3O08791 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ebf3O08791 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ebf3O08791 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ebf3O08791 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Ebf3O08791 Gm14508-201ENSMUST00000127049 901 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.49□□□□□ -0.25
Ebf3O08791 Gm37489-201ENSMUST00000191883 159 ntBASIC13.49□□□□□ -0.25
Ebf3O08791 Gm38158-201ENSMUST00000194617 339 ntBASIC13.49□□□□□ -0.25
Ebf3O08791 AC022775.2-201ENSMUST00000227885 646 ntBASIC13.49□□□□□ -0.25
Ebf3O08791 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.49□□□□□ -0.25
Ebf3O08791 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC13.49□□□□□ -0.25
Ebf3O08791 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
Ebf3O08791 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ebf3O08791 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.49□□□□□ -0.25
Ebf3O08791 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Ebf3O08791 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Ebf3O08791 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 AC096628.2-201ENSMUST00000225443 1413 ntBASIC13.48□□□□□ -0.25
Ebf3O08791 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Ebf3O08791 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms