Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Shisa8J3QNX5 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.51
Shisa8J3QNX5 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC11.83□□□□□ -0.51
Shisa8J3QNX5 Ptpru-201ENSMUST00000030741 4416 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Vsx2-202ENSMUST00000169934 3249 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Mmab-201ENSMUST00000031560 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Gm4875-201ENSMUST00000118257 786 ntBASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Gm5312-201ENSMUST00000203728 547 ntBASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 CT943659.1-201ENSMUST00000215459 326 ntBASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Arhgap27-204ENSMUST00000107024 3976 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Tnk2-205ENSMUST00000115124 4424 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Rlbp1-202ENSMUST00000179243 2142 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Gm19817-201ENSMUST00000199764 2132 ntBASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Twnk-201ENSMUST00000026227 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.83□□□□□ -0.52
Shisa8J3QNX5 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Csrnp3-207ENSMUST00000145598 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Tmem115-201ENSMUST00000010189 2194 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Brinp2-201ENSMUST00000004133 4167 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Ppargc1b-202ENSMUST00000075299 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Setdb1-201ENSMUST00000015841 4658 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Gm27321-201ENSMUST00000185021 205 ntBASIC11.82□□□□□ -0.52
Shisa8J3QNX5 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Gm42840-201ENSMUST00000200303 2251 ntBASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Pank4-202ENSMUST00000070953 2706 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Gm16070-203ENSMUST00000155588 1902 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Shisa8J3QNX5 Col6a2-201ENSMUST00000001181 3949 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Trak1-213ENSMUST00000211439 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Shisa8J3QNX5 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms