Protein–RNA interactions for Protein: G3X9F6

Sh3tc1, SH3 domain and tetratricopeptide repeats 1, mousemouse

Predictions only

Length 1,346 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc1G3X9F6 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 4930550C17Rik-201ENSMUST00000181629 1411 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Gm13296-201ENSMUST00000117854 997 ntBASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Gm13996-201ENSMUST00000118456 430 ntBASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Gm16296-201ENSMUST00000159905 325 ntBASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Nkx2-2os-202ENSMUST00000184407 458 ntBASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Rprl1-202ENSMUST00000198476 238 ntBASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Gzmn-202ENSMUST00000225535 989 ntBASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Clec4b2-201ENSMUST00000088455 1174 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Sh3tc1G3X9F6 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Gm45495-201ENSMUST00000200940 1700 ntBASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Gm12201-201ENSMUST00000120657 1234 ntBASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Gm14832-201ENSMUST00000121289 322 ntBASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Hmgn1-202ENSMUST00000133885 261 ntTSL 5 BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Gm24845-201ENSMUST00000158034 109 ntBASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Gm42997-202ENSMUST00000200321 985 ntBASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Gm8913-201ENSMUST00000209491 641 ntBASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 AC125206.1-201ENSMUST00000214070 739 ntTSL 5 BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Sh3tc1G3X9F6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc1G3X9F6 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc1G3X9F6 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc1G3X9F6 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc1G3X9F6 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc1G3X9F6 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc1G3X9F6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc1G3X9F6 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC15.6■□□□□ 0.09
Sh3tc1G3X9F6 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc1G3X9F6 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc1G3X9F6 CU062626.3-201ENSMUST00000225522 1411 ntBASIC15.6■□□□□ 0.09
Sh3tc1G3X9F6 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc1G3X9F6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc1G3X9F6 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Sh3tc1G3X9F6 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms