Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Arhgef16-207ENSMUST00000169623 2474 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Clasp1-216ENSMUST00000189738 5373 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Anxa8-201ENSMUST00000022519 1880 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Rph3a-201ENSMUST00000079204 4150 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Rita1-207ENSMUST00000177800 1668 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Sdad1-201ENSMUST00000031364 5020 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Ptchd3-201ENSMUST00000036690 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Gm14494-201ENSMUST00000118786 435 ntBASIC13.32□□□□□ -0.28
Trim55G3X8Y1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Gm2756-201ENSMUST00000195851 400 ntBASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 AC132467.2-202ENSMUST00000227726 559 ntBASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Telo2-201ENSMUST00000024987 3434 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Scml2-206ENSMUST00000112345 4847 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Gm13093-201ENSMUST00000126212 2485 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Hspa5-201ENSMUST00000028222 3672 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Scml2-201ENSMUST00000019101 4842 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trim55G3X8Y1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Gm43365-201ENSMUST00000196522 2106 ntBASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Cobl-202ENSMUST00000109650 5271 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 2410131K14Rik-201ENSMUST00000049138 5649 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Adam12-201ENSMUST00000067680 7675 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 AC084391.1-201ENSMUST00000200651 141 ntBASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Ahsa2-202ENSMUST00000109539 3583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Ttc27-201ENSMUST00000024882 2820 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Entpd8-203ENSMUST00000114380 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Myo18a-207ENSMUST00000102488 7409 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 AC166359.1-201ENSMUST00000220243 1871 ntBASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Mzf1-201ENSMUST00000069289 3597 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Tfdp2-204ENSMUST00000179065 2213 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Plekhn1-203ENSMUST00000217885 1982 ntTSL 5 BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Dnmt1-201ENSMUST00000004202 5367 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trim55G3X8Y1 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Atp6v0a1-201ENSMUST00000044721 4008 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Preb-201ENSMUST00000074840 6300 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Tex2-201ENSMUST00000042780 4934 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Ptgfr-201ENSMUST00000029670 6624 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Tpx2-206ENSMUST00000164120 4365 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Ocln-201ENSMUST00000022140 2839 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Gm45683-201ENSMUST00000210825 1247 ntBASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trim55G3X8Y1 Gm43984-201ENSMUST00000204572 2864 ntBASIC13.3□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms