Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
Nkx1-1G3UXB3 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.06
Nkx1-1G3UXB3 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm11596-201ENSMUST00000105058 1079 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Yipf6-202ENSMUST00000113811 930 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm11930-201ENSMUST00000117788 190 ntBASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm22275-201ENSMUST00000122470 310 ntBASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Spata3-207ENSMUST00000135440 732 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Zfp637-210ENSMUST00000164472 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm28935-201ENSMUST00000185737 568 ntTSL 2 BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm37404-201ENSMUST00000195726 359 ntBASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm43238-201ENSMUST00000196463 359 ntBASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm43367-201ENSMUST00000199986 625 ntBASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm44064-201ENSMUST00000204964 1087 ntBASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm45437-201ENSMUST00000209998 448 ntTSL 3 BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 AL603630.1-201ENSMUST00000214781 147 ntBASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm18730-201ENSMUST00000218038 343 ntBASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 6030440G07Rik-201ENSMUST00000221849 1090 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Spata3-201ENSMUST00000052854 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm4822-201ENSMUST00000077551 479 ntBASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm25517-201ENSMUST00000083865 134 ntBASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm26315-201ENSMUST00000083890 321 ntBASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm10029-201ENSMUST00000089635 330 ntBASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm35963-201ENSMUST00000211762 1425 ntTSL 5 BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Ahdc1-202ENSMUST00000105914 5898 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Nkx1-1G3UXB3 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 AC091458.1-201ENSMUST00000220902 1361 ntBASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Gm43195-201ENSMUST00000200614 2332 ntBASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Tbc1d22bos-201ENSMUST00000159875 826 ntTSL 3 BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Gm26973-201ENSMUST00000182105 696 ntTSL 3 BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Gm2707-201ENSMUST00000188979 714 ntBASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Gm38144-201ENSMUST00000192790 465 ntBASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Gm43743-201ENSMUST00000197898 697 ntBASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Gm44405-201ENSMUST00000198952 126 ntBASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Gm19649-201ENSMUST00000201126 822 ntBASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Gm43690-201ENSMUST00000201213 266 ntBASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Gm44176-201ENSMUST00000204336 276 ntTSL 5 BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Tial1-214ENSMUST00000205835 562 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Znrd1as-204ENSMUST00000209623 1218 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Cbx3-ps8-201ENSMUST00000214564 548 ntBASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 CT009550.5-201ENSMUST00000226286 382 ntBASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 AC164978.2-201ENSMUST00000226645 857 ntBASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Tepp-201ENSMUST00000098480 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Mbtd1-204ENSMUST00000107852 1930 ntTSL 5 BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Nkx1-1G3UXB3 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms