Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 Fpr1-201ENSMUST00000061516 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Pcdh17E9PXF0 Gm26593-201ENSMUST00000181848 1970 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Gm6222-202ENSMUST00000182143 629 ntBASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Gm2164-201ENSMUST00000184062 424 ntTSL 2 BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 n-R5s195-201ENSMUST00000082891 119 ntBASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Pcdh17E9PXF0 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Gm11591-201ENSMUST00000120063 702 ntBASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Olfr284-202ENSMUST00000206647 966 ntBASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Gm18935-201ENSMUST00000212692 664 ntBASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Mnt-201ENSMUST00000000291 4590 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Gm37133-201ENSMUST00000192705 1922 ntBASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.09□□□□□ -0.47
Pcdh17E9PXF0 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh17E9PXF0 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh17E9PXF0 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC12.08□□□□□ -0.48
Pcdh17E9PXF0 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.08□□□□□ -0.48
Pcdh17E9PXF0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Pcdh17E9PXF0 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh17E9PXF0 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Pcdh17E9PXF0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms