Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Uba52-201ENSMUST00000081940 541 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Dnm1l-202ENSMUST00000096229 4056 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Pigk-201ENSMUST00000045029 1761 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Oprm1-222ENSMUST00000135502 1363 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 9430078K24Rik-201ENSMUST00000218818 1082 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Taar8b-201ENSMUST00000092654 1035 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Gm22920-201ENSMUST00000102175 109 ntBASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Gm14193-201ENSMUST00000105067 153 ntBASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Gm12857-201ENSMUST00000117678 592 ntBASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Gm7069-201ENSMUST00000182418 1008 ntBASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Gm37406-201ENSMUST00000192478 500 ntTSL 3 BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Gm44270-201ENSMUST00000203084 1234 ntBASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Gm17541-201ENSMUST00000080062 525 ntBASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Anxa9-204ENSMUST00000164406 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Ccndbp1-203ENSMUST00000099489 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Col6a3E9PWQ3 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.39
Col6a3E9PWQ3 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Gm12681-201ENSMUST00000132337 700 ntTSL 3 BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Gm11706-201ENSMUST00000151282 316 ntTSL 5 BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 4930573C15Rik-201ENSMUST00000197707 777 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Lxn-201ENSMUST00000058981 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Gm5380-201ENSMUST00000119296 2136 ntBASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Pfdn5-203ENSMUST00000165671 830 ntTSL 2 BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Gm10318-202ENSMUST00000217996 639 ntTSL 5 BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Pgap2-201ENSMUST00000033292 1201 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Taar9-201ENSMUST00000041180 1047 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Sirt5-201ENSMUST00000066804 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Col6a3E9PWQ3 n-R5s64-201ENSMUST00000102019 119 ntBASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 S100a3-201ENSMUST00000001047 712 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Gm15620-201ENSMUST00000122949 270 ntBASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Gm25394-201ENSMUST00000157338 133 ntBASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Gm6548-201ENSMUST00000167498 1165 ntBASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 1110020A21Rik-201ENSMUST00000181147 853 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Gm26716-201ENSMUST00000181227 415 ntTSL 5 BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Olfr1347-205ENSMUST00000220413 964 ntBASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Cox10-201ENSMUST00000049091 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 F2-202ENSMUST00000111335 1969 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Gm26783-201ENSMUST00000181197 2377 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 AC171277.1-201ENSMUST00000216902 1441 ntBASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Gm15566-201ENSMUST00000121130 590 ntBASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Gm14232-201ENSMUST00000137176 446 ntTSL 3 BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Ighv5-11-201ENSMUST00000193354 371 ntBASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 4930413E15Rik-201ENSMUST00000202500 1290 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Gm4811-201ENSMUST00000220879 1220 ntBASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Timm9-210ENSMUST00000221892 734 ntTSL 5 BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 AC125209.1-201ENSMUST00000225812 766 ntBASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Col6a3E9PWQ3 Tmeff2-201ENSMUST00000081851 3343 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 62.2 ms