Protein–RNA interactions for Protein: B2RRE7

Otud4, OTU domain-containing protein 4, mousemouse

Known RBP Predictions only

Length 1,107 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otud4B2RRE7 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.33□□□□□ -0.44
Otud4B2RRE7 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud4B2RRE7 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud4B2RRE7 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud4B2RRE7 Gm6091-201ENSMUST00000098307 165 ntBASIC12.33□□□□□ -0.44
Otud4B2RRE7 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Otud4B2RRE7 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud4B2RRE7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud4B2RRE7 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Otud4B2RRE7 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud4B2RRE7 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud4B2RRE7 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Otud4B2RRE7 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Otud4B2RRE7 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.32□□□□□ -0.44
Otud4B2RRE7 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Mir1247-201ENSMUST00000116706 82 ntBASIC12.32□□□□□ -0.44
Otud4B2RRE7 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC12.32□□□□□ -0.44
Otud4B2RRE7 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.32□□□□□ -0.44
Otud4B2RRE7 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Otud4B2RRE7 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Gm15198-201ENSMUST00000117283 177 ntBASIC12.31□□□□□ -0.44
Otud4B2RRE7 Gm12416-201ENSMUST00000120911 1008 ntBASIC12.31□□□□□ -0.44
Otud4B2RRE7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Gm26464-201ENSMUST00000157094 305 ntBASIC12.31□□□□□ -0.44
Otud4B2RRE7 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Gm29649-201ENSMUST00000185649 419 ntBASIC12.31□□□□□ -0.44
Otud4B2RRE7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Gm7561-201ENSMUST00000211203 886 ntBASIC12.31□□□□□ -0.44
Otud4B2RRE7 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.31□□□□□ -0.44
Otud4B2RRE7 Gm11661-201ENSMUST00000121761 1327 ntBASIC12.31□□□□□ -0.44
Otud4B2RRE7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Unc13a-201ENSMUST00000030170 10255 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Otud4B2RRE7 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.3□□□□□ -0.44
Otud4B2RRE7 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Otud4B2RRE7 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Otud4B2RRE7 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Otud4B2RRE7 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Otud4B2RRE7 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Otud4B2RRE7 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Otud4B2RRE7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 186.9 ms