Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Pdik1l-201ENSMUST00000061234 4686 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Gm18206-201ENSMUST00000207027 926 ntBASIC10.48□□□□□ -0.73
Gm12887B1AVM1 AC156504.2-201ENSMUST00000213800 711 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 AC138604.1-201ENSMUST00000226969 739 ntBASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Pcdh15-238ENSMUST00000193739 5034 ntAPPRIS ALT2 TSL 5 BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Itgal-202ENSMUST00000117762 5222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Dab2ip-209ENSMUST00000135741 4128 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Wnt3-201ENSMUST00000000127 3076 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Gm1995-201ENSMUST00000220838 2602 ntBASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Gm5422-201ENSMUST00000050717 2721 ntBASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Mtmr10-201ENSMUST00000032736 5205 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Psd2-201ENSMUST00000115716 4607 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
Gm12887B1AVM1 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Zeb2-202ENSMUST00000068415 5624 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Acacb-201ENSMUST00000031583 8482 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Cyb561d1-201ENSMUST00000065664 4058 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Gm6210-201ENSMUST00000204734 1942 ntBASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Gm14730-201ENSMUST00000122378 1045 ntBASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Gm27494-201ENSMUST00000184735 189 ntBASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Gm27772-201ENSMUST00000184900 187 ntBASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Gm43125-201ENSMUST00000201724 730 ntBASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Gm7498-201ENSMUST00000203282 1084 ntBASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Gm44124-201ENSMUST00000204159 472 ntBASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 AC157950.1-201ENSMUST00000217561 2168 ntBASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Gm38569-201ENSMUST00000205476 2228 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Slc20a1-202ENSMUST00000110315 3219 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Ercc2-202ENSMUST00000108460 3485 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Kdm4d-201ENSMUST00000058796 2695 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Gabbr1-203ENSMUST00000172792 4036 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Klf11-201ENSMUST00000020982 4086 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
Gm12887B1AVM1 Ttll12-201ENSMUST00000016901 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Mzf1-205ENSMUST00000182515 3340 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Lef1-204ENSMUST00000106341 3357 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Lef1-202ENSMUST00000066849 3398 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Zscan10-202ENSMUST00000115509 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Zc3h12d-201ENSMUST00000039484 4092 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Smc4-201ENSMUST00000042901 4316 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Gm2670-201ENSMUST00000180668 2804 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Pitpnm2-201ENSMUST00000086123 6620 ntAPPRIS P3 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Rgs12-207ENSMUST00000114285 2924 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Gm12887B1AVM1 Jarid2-201ENSMUST00000044608 5019 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms