Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Gm24749-201ENSMUST00000157838 343 ntBASIC14.34□□□□□ -0.11
Scn3aA2ASI5 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Gm13097-201ENSMUST00000210722 397 ntBASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Scn3aA2ASI5 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scn3aA2ASI5 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scn3aA2ASI5 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Scn3aA2ASI5 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scn3aA2ASI5 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.33□□□□□ -0.11
Scn3aA2ASI5 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC14.33□□□□□ -0.11
Scn3aA2ASI5 Fez1-208ENSMUST00000163816 1285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scn3aA2ASI5 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.33□□□□□ -0.11
Scn3aA2ASI5 Pfn1-201ENSMUST00000018437 861 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Scn3aA2ASI5 Rassf5-205ENSMUST00000212202 958 ntTSL 5 BASIC14.33□□□□□ -0.11
Scn3aA2ASI5 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC14.33□□□□□ -0.11
Scn3aA2ASI5 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Eno3-206ENSMUST00000170716 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Fam166b-203ENSMUST00000107929 865 ntAPPRIS P5 TSL 5 BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Gm14832-201ENSMUST00000121289 322 ntBASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Rassf4-202ENSMUST00000203029 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Scn3aA2ASI5 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Gm5846-201ENSMUST00000193146 1414 ntBASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Rnls-202ENSMUST00000163093 1378 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Spats2l-203ENSMUST00000164302 2088 ntTSL 5 BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Ccdc25-201ENSMUST00000022614 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 4930522L14Rik-201ENSMUST00000100937 599 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Ldlrad2-201ENSMUST00000178923 429 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Il2rg-201ENSMUST00000033664 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Scn3aA2ASI5 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Scn3aA2ASI5 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms