Protein–RNA interactions for Protein: A2APX8

Scn1a, Sodium channel protein type 1 subunit alpha, mousemouse

Predictions only

Length 2,009 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1aA2APX8 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.53□□□□□ -0.24
Scn1aA2APX8 Gulp1-203ENSMUST00000160854 1399 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Scn1aA2APX8 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn1aA2APX8 Gm16087-201ENSMUST00000124395 964 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Scn1aA2APX8 Smim5-201ENSMUST00000131566 700 ntTSL 2 BASIC13.52□□□□□ -0.24
Scn1aA2APX8 4933407E24Rik-201ENSMUST00000133499 969 ntTSL 2 BASIC13.52□□□□□ -0.24
Scn1aA2APX8 Gm15501-201ENSMUST00000133910 849 ntTSL 3 BASIC13.52□□□□□ -0.24
Scn1aA2APX8 Gm8018-201ENSMUST00000173536 789 ntBASIC13.52□□□□□ -0.24
Scn1aA2APX8 Gm19963-201ENSMUST00000208413 1255 ntBASIC13.52□□□□□ -0.24
Scn1aA2APX8 Gm9257-201ENSMUST00000221254 232 ntBASIC13.52□□□□□ -0.24
Scn1aA2APX8 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn1aA2APX8 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn1aA2APX8 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
Scn1aA2APX8 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn1aA2APX8 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn1aA2APX8 Skp2-203ENSMUST00000190131 1819 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Scn1aA2APX8 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.24
Scn1aA2APX8 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Scn1aA2APX8 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Gm11222-201ENSMUST00000119005 738 ntBASIC13.52□□□□□ -0.25
Scn1aA2APX8 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Gm38266-201ENSMUST00000194931 421 ntBASIC13.52□□□□□ -0.25
Scn1aA2APX8 Gm5904-201ENSMUST00000210286 865 ntBASIC13.52□□□□□ -0.25
Scn1aA2APX8 Gm39404-201ENSMUST00000216350 313 ntBASIC13.52□□□□□ -0.25
Scn1aA2APX8 AC166095.1-201ENSMUST00000223731 1241 ntBASIC13.52□□□□□ -0.25
Scn1aA2APX8 AC093022.5-201ENSMUST00000226841 1079 ntBASIC13.52□□□□□ -0.25
Scn1aA2APX8 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Zfp819-203ENSMUST00000120935 2156 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC13.52□□□□□ -0.25
Scn1aA2APX8 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Scn1aA2APX8 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.51□□□□□ -0.25
Scn1aA2APX8 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Gm7584-201ENSMUST00000175829 940 ntBASIC13.51□□□□□ -0.25
Scn1aA2APX8 Gm37201-201ENSMUST00000191845 523 ntBASIC13.51□□□□□ -0.25
Scn1aA2APX8 Gm44364-201ENSMUST00000198368 141 ntBASIC13.51□□□□□ -0.25
Scn1aA2APX8 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Tmem247-201ENSMUST00000042172 752 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.51□□□□□ -0.25
Scn1aA2APX8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Gm4366-201ENSMUST00000201488 1342 ntBASIC13.51□□□□□ -0.25
Scn1aA2APX8 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Vmp1-201ENSMUST00000018315 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Aldh9a1-201ENSMUST00000028004 2835 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Gm14921-201ENSMUST00000118643 908 ntBASIC13.51□□□□□ -0.25
Scn1aA2APX8 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Mospd4-201ENSMUST00000180618 576 ntBASIC13.51□□□□□ -0.25
Scn1aA2APX8 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.51□□□□□ -0.25
Scn1aA2APX8 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.51□□□□□ -0.25
Scn1aA2APX8 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Scn1aA2APX8 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms