Protein–RNA interactions for Protein: A2AN08

Ubr4, E3 ubiquitin-protein ligase UBR4, mousemouse

Predictions only

Length 5,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr4A2AN08 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Tbc1d22bos-202ENSMUST00000163069 1349 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Plac8-203ENSMUST00000112910 1224 ntAPPRIS P1 TSL 2 BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Gm11836-201ENSMUST00000121022 441 ntBASIC6.65□□□□□ -1.35
Ubr4A2AN08 Mir6934-201ENSMUST00000183965 62 ntBASIC6.65□□□□□ -1.35
Ubr4A2AN08 Gm8384-201ENSMUST00000190905 704 ntBASIC6.65□□□□□ -1.35
Ubr4A2AN08 Gm37270-201ENSMUST00000194277 330 ntBASIC6.65□□□□□ -1.35
Ubr4A2AN08 Gm35625-201ENSMUST00000210416 316 ntTSL 3 BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Crygf-201ENSMUST00000027082 627 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Defb12-201ENSMUST00000062113 1003 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Gm18798-201ENSMUST00000187264 1700 ntBASIC6.65□□□□□ -1.35
Ubr4A2AN08 Henmt1-205ENSMUST00000196533 1491 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Ube2d3-210ENSMUST00000197539 2515 ntAPPRIS P2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Unc5d-205ENSMUST00000211448 3087 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Ubr4A2AN08 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Fhl3-202ENSMUST00000106199 1139 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Cd63-ps-202ENSMUST00000154992 717 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm3551-201ENSMUST00000190750 664 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Ighv6-7-201ENSMUST00000193397 357 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Ubr4A2AN08 4930509H03Rik-201ENSMUST00000196088 1215 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm45758-201ENSMUST00000212448 1006 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Chmp3-202ENSMUST00000065364 998 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm45779-201ENSMUST00000212189 4064 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Themis3-201ENSMUST00000024914 1797 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm5380-201ENSMUST00000119296 2136 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm24300-201ENSMUST00000177809 109 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm24017-201ENSMUST00000178726 109 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm23952-201ENSMUST00000179380 109 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm45925-202ENSMUST00000219904 1136 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm18504-201ENSMUST00000220917 929 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm10254-201ENSMUST00000052888 867 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC6.64□□□□□ -1.35
Ubr4A2AN08 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Lin37-202ENSMUST00000108164 1312 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm11540-201ENSMUST00000117457 780 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm15625-201ENSMUST00000117617 1093 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm10169-201ENSMUST00000121822 348 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm13827-201ENSMUST00000148801 372 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Apoa5-205ENSMUST00000215187 495 ntTSL 5 BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Mitd1-201ENSMUST00000027257 1231 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm9768-201ENSMUST00000206007 2861 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Riox2-202ENSMUST00000120667 2200 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm44981-201ENSMUST00000205549 1943 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Capn3-204ENSMUST00000110716 2752 ntTSL 5 BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Oprm1-208ENSMUST00000092734 1569 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Mir683-2-201ENSMUST00000102099 109 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Mir683-1-201ENSMUST00000179371 109 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Rps4l-ps-201ENSMUST00000059737 768 ntBASIC6.64□□□□□ -1.35
Ubr4A2AN08 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Cd207-201ENSMUST00000037882 1522 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Vmac-202ENSMUST00000164907 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC6.64□□□□□ -1.35
Ubr4A2AN08 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms