Protein–RNA interactions for Protein: A2AH22

Ambra1, Activating molecule in BECN1-regulated autophagy protein 1, mousemouse

Predictions only

Length 1,300 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ambra1A2AH22 Gm14724-201ENSMUST00000118400 537 ntBASIC15.27■□□□□ 0.04
Ambra1A2AH22 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15.27■□□□□ 0.04
Ambra1A2AH22 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ambra1A2AH22 Prdx5-203ENSMUST00000149261 755 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Ambra1A2AH22 Ubl5-206ENSMUST00000161486 794 ntTSL 2 BASIC15.27■□□□□ 0.04
Ambra1A2AH22 Taf9-201ENSMUST00000167256 1230 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
Ambra1A2AH22 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC15.27■□□□□ 0.04
Ambra1A2AH22 Stpg4-202ENSMUST00000186211 591 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Ambra1A2AH22 Gm44958-201ENSMUST00000203734 736 ntBASIC15.27■□□□□ 0.04
Ambra1A2AH22 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC15.27■□□□□ 0.04
Ambra1A2AH22 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ambra1A2AH22 Nceh1-202ENSMUST00000091284 830 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ambra1A2AH22 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ambra1A2AH22 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ambra1A2AH22 Micall2-201ENSMUST00000044642 3346 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ambra1A2AH22 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ambra1A2AH22 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
Ambra1A2AH22 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ambra1A2AH22 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ambra1A2AH22 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC15.27■□□□□ 0.03
Ambra1A2AH22 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ambra1A2AH22 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ambra1A2AH22 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ambra1A2AH22 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ambra1A2AH22 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Tmem190-201ENSMUST00000013235 589 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 D630008O14Rik-202ENSMUST00000149909 1043 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Gm5778-201ENSMUST00000171003 1072 ntBASIC15.26■□□□□ 0.03
Ambra1A2AH22 1700088E04Rik-206ENSMUST00000187550 1168 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Gm10774-201ENSMUST00000188689 204 ntBASIC15.26■□□□□ 0.03
Ambra1A2AH22 Gm3332-201ENSMUST00000189337 928 ntBASIC15.26■□□□□ 0.03
Ambra1A2AH22 Gm43184-201ENSMUST00000197247 542 ntBASIC15.26■□□□□ 0.03
Ambra1A2AH22 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC15.26■□□□□ 0.03
Ambra1A2AH22 1700028J19Rik-201ENSMUST00000037220 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Immp1l-201ENSMUST00000037499 955 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Gm6781-201ENSMUST00000038304 1242 ntBASIC15.26■□□□□ 0.03
Ambra1A2AH22 Fam151b-201ENSMUST00000040106 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Tagln3-201ENSMUST00000096057 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Gm28386-201ENSMUST00000189147 1849 ntBASIC15.26■□□□□ 0.03
Ambra1A2AH22 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Pax5-203ENSMUST00000107825 1445 ntTSL 5 BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ambra1A2AH22 Hmg20a-204ENSMUST00000214869 1782 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Gm38058-201ENSMUST00000194323 4368 ntBASIC15.25■□□□□ 0.03
Ambra1A2AH22 Tspan32-201ENSMUST00000009396 1582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Pcgf2-203ENSMUST00000103149 817 ntTSL 5 BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Krtap4-8-201ENSMUST00000107439 983 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Rab15-202ENSMUST00000118604 778 ntTSL 3 BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Rab15-203ENSMUST00000121716 739 ntTSL 3 BASIC15.25■□□□□ 0.03
Ambra1A2AH22 H1foo-203ENSMUST00000161969 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Tspo2-205ENSMUST00000162481 473 ntTSL 5 BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Erh-202ENSMUST00000166931 506 ntTSL 2 BASIC15.25■□□□□ 0.03
Ambra1A2AH22 C730034F03Rik-201ENSMUST00000168646 1280 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Gm8343-201ENSMUST00000182705 994 ntBASIC15.25■□□□□ 0.03
Ambra1A2AH22 Gm10550-201ENSMUST00000188846 982 ntTSL 2 BASIC15.25■□□□□ 0.03
Ambra1A2AH22 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Gm6905-201ENSMUST00000205729 511 ntBASIC15.25■□□□□ 0.03
Ambra1A2AH22 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Gm10371-202ENSMUST00000228010 1081 ntBASIC15.25■□□□□ 0.03
Ambra1A2AH22 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Gm26448-201ENSMUST00000082446 203 ntBASIC15.25■□□□□ 0.03
Ambra1A2AH22 1110025L11Rik-201ENSMUST00000089104 591 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Gm26685-201ENSMUST00000181831 2023 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Gm28719-201ENSMUST00000187779 1757 ntBASIC15.25■□□□□ 0.03
Ambra1A2AH22 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Ambra1A2AH22 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Ambra1A2AH22 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Ambra1A2AH22 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Ambra1A2AH22 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms