Protein–RNA interactions for Protein: A0A0G2JDP3

Trav9n-2, T cell receptor alpha variable 9D-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-2A0A0G2JDP3 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Cul9-204ENSMUST00000182485 7848 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Ncapd3-201ENSMUST00000073127 5499 ntAPPRIS P2 TSL 5 BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC9.45□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Synj2-202ENSMUST00000080283 4793 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Cacna1g-210ENSMUST00000107792 7981 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm43417-201ENSMUST00000201586 5207 ntBASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm12928-201ENSMUST00000117115 573 ntBASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm8515-201ENSMUST00000194852 576 ntBASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm6745-201ENSMUST00000199216 526 ntBASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 AC155252.1-201ENSMUST00000226462 1208 ntBASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 2610528J11Rik-201ENSMUST00000030261 958 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Plcg1-202ENSMUST00000103115 4435 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm5385-201ENSMUST00000118988 1559 ntBASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Reln-207ENSMUST00000161356 11699 ntAPPRIS P3 TSL 5 BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm42863-201ENSMUST00000197875 2958 ntBASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Mcm9-204ENSMUST00000219838 4132 ntTSL 5 BASIC9.44□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Prpf8-201ENSMUST00000018449 7442 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Slc4a2-202ENSMUST00000115047 4264 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Rai1-207ENSMUST00000171108 7125 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Arhgap20os-204ENSMUST00000152203 2113 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm14350-201ENSMUST00000116642 640 ntBASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm16202-201ENSMUST00000117532 544 ntBASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm6152-201ENSMUST00000151704 340 ntBASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Trav9n-2A0A0G2JDP3 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms