Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Gm7002-201ENSMUST00000221386 2165 ntBASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Ldb3-207ENSMUST00000227819 1499 ntBASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Gm44401-201ENSMUST00000204462 2375 ntBASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Slc6a6-201ENSMUST00000032185 6186 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Arsa-202ENSMUST00000165199 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Man2c1-215ENSMUST00000161182 2909 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trav5-4A0A075B652 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Trim55-201ENSMUST00000029139 2595 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Gm45706-201ENSMUST00000213063 2136 ntBASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Fen1-201ENSMUST00000025651 2341 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Adipor2-202ENSMUST00000169744 3489 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Tspan12-201ENSMUST00000031678 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Grin1-205ENSMUST00000114312 3838 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Grin1-207ENSMUST00000114317 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Gm6218-201ENSMUST00000219812 628 ntBASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Prodh-205ENSMUST00000136776 2041 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Sugp2-201ENSMUST00000093458 3874 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.66
Trav5-4A0A075B652 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav5-4A0A075B652 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav5-4A0A075B652 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC10.9□□□□□ -0.67
Trav5-4A0A075B652 Zfp541-202ENSMUST00000209369 4879 ntAPPRIS P2 TSL 5 BASIC10.9□□□□□ -0.67
Trav5-4A0A075B652 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav5-4A0A075B652 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.9□□□□□ -0.67
Trav5-4A0A075B652 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav5-4A0A075B652 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav5-4A0A075B652 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav5-4A0A075B652 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav5-4A0A075B652 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC10.9□□□□□ -0.67
Trav5-4A0A075B652 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5-4A0A075B652 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav5-4A0A075B652 Eprs-201ENSMUST00000046514 4906 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5-4A0A075B652 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5-4A0A075B652 Rbm10-202ENSMUST00000082089 2562 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
Trav5-4A0A075B652 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5-4A0A075B652 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5-4A0A075B652 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.89□□□□□ -0.67
Trav5-4A0A075B652 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC10.89□□□□□ -0.67
Trav5-4A0A075B652 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav5-4A0A075B652 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5-4A0A075B652 Kcnd1-201ENSMUST00000009875 5287 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5-4A0A075B652 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5-4A0A075B652 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav5-4A0A075B652 Vps52-201ENSMUST00000025178 3332 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
Trav5-4A0A075B652 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
Trav5-4A0A075B652 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
Trav5-4A0A075B652 Gm12416-201ENSMUST00000120911 1008 ntBASIC10.89□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 33.5 ms