Protein–RNA interactions for Protein: S4R1M3

H2afb2, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb2S4R1M3 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Gm26819-201ENSMUST00000180656 5128 ntTSL 5 BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Gm13127-201ENSMUST00000118978 1389 ntBASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Gm12960-201ENSMUST00000120017 1066 ntBASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Gm12138-201ENSMUST00000122180 951 ntBASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Gm10156-201ENSMUST00000122364 462 ntBASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Mir1894-201ENSMUST00000122802 81 ntBASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Gm11752-201ENSMUST00000143291 510 ntTSL 2 BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Gm8598-201ENSMUST00000221184 836 ntBASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Gm5356-201ENSMUST00000093326 615 ntBASIC12.99□□□□□ -0.33
H2afb2S4R1M3 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Agt-201ENSMUST00000063278 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
H2afb2S4R1M3 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Bicd1-202ENSMUST00000086829 9667 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Gm9816-201ENSMUST00000122292 1414 ntBASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Spock3-201ENSMUST00000093480 3024 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Ptgr2-208ENSMUST00000147363 1869 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Zfp64-203ENSMUST00000109162 2848 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Gm8213-201ENSMUST00000118191 441 ntBASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Gm12539-201ENSMUST00000121549 1098 ntBASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Unkl-205ENSMUST00000161679 1053 ntTSL 5 BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Gm5819-201ENSMUST00000171469 465 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Gm6244-201ENSMUST00000178732 841 ntBASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Proscos-202ENSMUST00000178990 666 ntBASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Gm28693-202ENSMUST00000190758 331 ntBASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Gm9794-201ENSMUST00000202370 423 ntBASIC12.98□□□□□ -0.33
H2afb2S4R1M3 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Gm17794-201ENSMUST00000220252 955 ntBASIC12.98□□□□□ -0.33
H2afb2S4R1M3 AC093022.5-201ENSMUST00000226841 1079 ntBASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Wdyhv1-206ENSMUST00000227142 786 ntBASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.98□□□□□ -0.33
H2afb2S4R1M3 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
H2afb2S4R1M3 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 60.9 ms