Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Asb9-201ENSMUST00000033756 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Gm21964-203ENSMUST00000219454 1513 ntAPPRIS P5 TSL 5 BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 2210406O10Rik-202ENSMUST00000122882 1743 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Gm15703-201ENSMUST00000120250 880 ntBASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Gm9083-201ENSMUST00000120423 819 ntBASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Gm11597-201ENSMUST00000121423 964 ntBASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Gm8908-201ENSMUST00000121633 1024 ntBASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Mospd4-201ENSMUST00000180618 576 ntBASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Scn8aQ9WTU3 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Luc7l2-207ENSMUST00000161227 2405 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Ipo13-201ENSMUST00000036156 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 CT010488.1-201ENSMUST00000214890 1522 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Hmgcll1-202ENSMUST00000117981 1189 ntTSL 5 BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Gm37489-201ENSMUST00000191883 159 ntBASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Fxyd1-202ENSMUST00000071697 522 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Tars2-201ENSMUST00000029752 2400 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Scn8aQ9WTU3 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Tmem53-203ENSMUST00000106434 923 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Gm44364-201ENSMUST00000198368 141 ntBASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Gm19963-201ENSMUST00000208413 1255 ntBASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Rps12-203ENSMUST00000218107 584 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Tcf25-201ENSMUST00000057934 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Nox3-201ENSMUST00000115800 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Scn8aQ9WTU3 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.96□□□□□ -0.34
Scn8aQ9WTU3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Scn8aQ9WTU3 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn8aQ9WTU3 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Scn8aQ9WTU3 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms