Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.26□□□□□ -0.45
Trim3Q9R1R2 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim3Q9R1R2 Gm6244-201ENSMUST00000178732 841 ntBASIC12.26□□□□□ -0.45
Trim3Q9R1R2 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Trim3Q9R1R2 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim3Q9R1R2 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.26□□□□□ -0.45
Trim3Q9R1R2 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.26□□□□□ -0.45
Trim3Q9R1R2 Gm17870-201ENSMUST00000219489 1174 ntBASIC12.26□□□□□ -0.45
Trim3Q9R1R2 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim3Q9R1R2 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.26□□□□□ -0.45
Trim3Q9R1R2 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim3Q9R1R2 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim3Q9R1R2 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
Trim3Q9R1R2 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim3Q9R1R2 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim3Q9R1R2 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim3Q9R1R2 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Trim3Q9R1R2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim3Q9R1R2 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Trim3Q9R1R2 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Rtkn2-203ENSMUST00000117086 2246 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Rbm48-201ENSMUST00000042753 2368 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Mir1894-201ENSMUST00000122802 81 ntBASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Klk12-201ENSMUST00000014063 924 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Gm38144-201ENSMUST00000192790 465 ntBASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Gm7287-201ENSMUST00000205267 602 ntBASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Gm17794-201ENSMUST00000220252 955 ntBASIC12.25□□□□□ -0.45
Trim3Q9R1R2 AC110817.1-201ENSMUST00000225706 605 ntBASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Gnat2-201ENSMUST00000058669 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Chrnb2-201ENSMUST00000029562 6399 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Trim3Q9R1R2 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Gm14342-201ENSMUST00000137629 2119 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Gm8602-201ENSMUST00000184045 607 ntBASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Trim3Q9R1R2 Kndc1-201ENSMUST00000053445 7299 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms